Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2502 ATGAAAGGAAACAAGCCCTACCTCGTTGTGATTGTCATACAAGCCATATATGCTGCCATGTTTCTCCTCTCAAAAGCCGCATTCGACCATGGCATGAACAATTTCATCTTCGTCTTCTATAGGCAGGCCATAGCCACTGTTTTCTTAGCCCCTTTTGCATTCTTCTTCGAATGGAAAACTGCACCGCCTTTGTCATTTGTGACCTTCTGCAAGATCTTCTTCCTTTCTTTCTTTGGGATTACTACGAGCTTGGACGTATATGGTGTTGCTCTTATTTATACTTCAGCAACTTTGGCTGCTGCTACCACGAACTGCCTTCCGGTCATCACCTTCTTCTTGGCTCTCTTACTCAGGATTGAAGTATTCAAAGTCAAGTCAGCCGCAGGGATTGCTAAATTGATTGGTGTGGTGACATGCTTGGGTGGAGCAGCAATCCTTGCTTTCTATAAAGGTCCTCATTTTCAACTTTTACACCATCACCTTTTAGGGTACCACAAAAGCCATCAAGTTCAGGGTTCCTCTGCCTCATGGATTAAGGGTTGCTTCCTCATGCTCCTCTCTAATTCCTCTTTTGGGTTGTGGCTTGTGCTGCAGGTTTTTGTTGTAAAAGGTTACCCTTCAAAGCTGCTTCTCACAACTCTTCAATGTTTCTTGAGCTCAATTCAGTCATTTATCATTGCGTTTGCCTTAGAAAGAAACATTGAGCAATGGAAGCTGGGTTGGAATGTCAATCTGCTCGCCGTAGTATATTGTGGAATTATGGTGACTGCAGTCACGTATTACTTACAAACATGGGTTATAGAGAAGAAAGGGCCTGTGTTTCTGGCCATGTCAACACCATTGTCTCTGATCATGACCATCTTCGCCTCCGCAATTCTCTTGGGCGAGATAATTACTTTGGGAAGCATTTTAGGCGGGTTCCTGCTGGTTCTAGGACTGTACAGCGTTCTGTGGGGAAAGAGAAGAGAGGAAATGCCGAAACCCTCCTTAGACTTGGAGCAGCCATCGCTGTAG 1014 0.4467 MKGNKPYLVVIVIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQAIATVFLAPFAFFFEWKTAPPLSFVTFCKIFFLSFFGITTSLDVYGVALIYTSATLAAATTNCLPVITFFLALLLRIEVFKVKSAAGIAKLIGVVTCLGGAAILAFYKGPHFQLLHHHLLGYHKSHQVQGSSASWIKGCFLMLLSNSSFGLWLVLQVFVVKGYPSKLLLTTLQCFLSSIQSFIIAFALERNIEQWKLGWNVNLLAVVYCGIMVTAVTYYLQTWVIEKKGPVFLAMSTPLSLIMTIFASAILLGEIITLGSILGGFLLVLGLYSVLWGKRREEMPKPSLDLEQPSL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2502 337 PANTHER WAT1-RELATED PROTEIN 7 325 - -
Dod04g2502 337 Pfam EamA-like transporter family 179 317 IPR000620 GO:0016020|GO:0016021
Dod04g2502 337 Pfam EamA-like transporter family 5 133 IPR000620 GO:0016020|GO:0016021
Dod04g2502 337 PANTHER WAT1-RELATED PROTEIN 7 325 IPR030184 GO:0016021|GO:0022857
Dod04g2502 337 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 322 - -
Dod04g2502 337 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2502 Dod-Chr4 48845766 48850323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2502 1 251 Nodulin-like Gene Family AT5G64700 63.178 3.26e-99 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2502 - - ccaj:109799350 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2502 04 48845766 48850323 Dod04g2502 04 48845766 48850323 ECH
Dod04g2502 04 48845766 48850323 Dod09g1777 09 39420933 39424874 ECH
Dod04g2502 04 48845766 48850323 Dod09g1778 09 39438355 39443868 PCT