Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2499 ATGGCAAGATCACATGAAAACGAGCTCCCATTGAAGGCTCTCGGCTGGGCTGCTAGGGATACCTCTGGCATCCTCTCTCCCTTTCATTTCTCCAGAAGGGAAAATGGCCCTGATGATGTCACACTGAAAATTCTGTACTGTGGGGTTTGCCATTCGGATCTGCATACCCTCAAGAACGATTGGGGTTTCACTACTTACCCTGTTGTTCCTGGGCATGAAATTGTTGGCGTTGTGACCAAAACTGGAAGTAATGTGCAAAAATTCAAAGAGGGTGATAAAGTTGGAGTGGGTGTAATAGTAGACTCTTGTAAGGAATGTGAGTGTTGCCAGCAGGATCTGGAGAATTACTGTTCTAAACCTGTATTCACCTATAACTCTCCTTATGATGGGTCGAGAACCTATGGTGGCTACTCTGATTTCGTGGTTGTTCACCAGCGGTTTGTGCTCTTATTCCCTGAGAACTTACCCCTTGATGCTGGTGCTCCCCTACTGTGCGCTGGGATTACTGTGTATAGCCCTATGAAGTATTATGGGATGACAGAGCCAGGTAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAGTTTGGTAAAGCATTTGGTCTCAAAGTCACTGTCATTAGTAGCTCTCCCAACAAGGAAGCTGAAGCCATTGGCAGGCTTGGGGCTGATTCTTTCCTTGTTTCCTCTGACCCTGCAAAAATGAAGGCTGCTTTGGGAACCATGGACTATATCATAGACACAATTTCTGCTGTTCATTCTCTGATTCCCCTGCTTGGTCTGCTGAAGCTGAATGGGAAGCTGGTCACTGTTGGGTTGCCTAGCAAGCCCCTTGAGCTGCCTGTCTTCTCCATAGTTGCAGGACGGAAGCTTGTAGGAGGGAGCAACTTTGGAGGGCTAAAGGAGACTCAGGAGATGCTTGATTTCTGTGGAAAGCATAACATAACTGCGGATATTGAGCTGATTAAGATGGACCAAATCAACACAGCGATGGAAAGGCTTAGCAAAGCTGATGTGAAATATCGCTTCGTGATTGATGTGGCCAACTCCTTACCTAGTAATCTGTAG 1083 0.4681 MARSHENELPLKALGWAARDTSGILSPFHFSRRENGPDDVTLKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKTGSNVQKFKEGDKVGVGVIVDSCKECECCQQDLENYCSKPVFTYNSPYDGSRTYGGYSDFVVVHQRFVLLFPENLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKEAEAIGRLGADSFLVSSDPAKMKAALGTMDYIIDTISAVHSLIPLLGLLKLNGKLVTVGLPSKPLELPVFSIVAGRKLVGGSNFGGLKETQEMLDFCGKHNITADIELIKMDQINTAMERLSKADVKYRFVIDVANSLPSNL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2499 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 320 IPR036291 -
Dod04g2499 360 Pfam Zinc-binding dehydrogenase 193 314 IPR013149 -
Dod04g2499 360 SUPERFAMILY GroES-like 21 184 IPR011032 -
Dod04g2499 360 SMART PKS_ER_names_mod 23 350 IPR020843 GO:0016491
Dod04g2499 360 Gene3D - 166 322 - -
Dod04g2499 360 Pfam Alcohol dehydrogenase GroES-like domain 37 149 IPR013154 -
Dod04g2499 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Dod04g2499 360 CDD CAD1 15 351 - -
Dod04g2499 360 PANTHER ALDEHYDE REDUCTASE 12 357 - -
Dod04g2499 360 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 12 357 - -
Dod04g2499 360 Gene3D - 16 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2499 Dod-Chr4 48801005 48804686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2499 12 356 Monolignol Biosynthesis Gene Families AT2G21730 72.989 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2499 K00083 - gmx:100819684 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2499 04 48801005 48804686 Dod04g2499 04 48801005 48804686 ECH