Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2483 ATGGGGTGTGTCAACAGCACGTCTAGTCCCCCCTCTTCTCTAAATCGCAACCTTGAGAGGTTGAAACGTGACAATGCTTATGCCACTCCCAAGAGATGTTCTGCTTCTGCCTCTGCGGGTAAACCACCACTCAGCCATGAGGACTCTTCGAGGAAACACTCCTCTGTATCTAAGCAGGCAGAGGACACTAGCACTAATAAAATGGGACTTAGAGTGAAACTGATTCGTGATGAGCAGCACCACAGTTATAAGACTTCTTCTTCAGGTGGCCCAGTAGATCGAGATCATAGGGACATTAAGGAAAAGGAAAAGGAAAAGGAAAAGGGTGTTGCTAATACCAATGCTACTATAGATGAAGTGAACAGTGAGGTTGGGAATGTTTCTAGTAAGTCTGAAGAGATTAAGAAGAAGAACAACATTGGAACCTATTATGAGCTGGTGGATGGGTGGCCCAAATGGCTGGTTGATAATATCCCACAGCAGGTTTTGGATGGTTTGGTTCCCAAAAGCGCCCATTCCTATGAAAAACTCGGAAAGGTTGGACGTGGAACATATAGCAATGTATACAAAGCCCGGGATAAGGACACTGGGAAGATTGTTGCCTTGAAGAAGGTACGCTTTGACACGTCGGATTCTGAGAGTGTAAAGTTCATGGCAAGAGAGATCAGGATACTGCAGAAGCTGGATCATCCCAATGTCATCAAACTTAGAGGACTGGCAACTTCAAGGATGCAGTATAGTCTCTATCTGGTTTTTGATTACATGCAGGCTGACCTTACCAGAATTATCTCCCGCCCTGGGGAGGAGCTCACTGAACCACAGATCAAGTGTTATATGCAGCAGCTGCTTTATGGGCTCCGGCATTGTCATGAGAAAGGAGTTATACACCGAGATATTAAGCCTTCTAACTTGTTAATTGATAAAAGAGGGGTGCTCAAAATTGCAGATTTTGGACTAGCAAGCACTAAACATCAGGGGCCTTTCACAAATAGAGTGGTGACACTTTGGTATAGGGCTCCTGAACTTCTTTTAGGTTCAACTGACTATGGATTTGGAATTGATCTCTGGAGTGCTGGATGCCTATTAGCTGAGATGATTGTTCGAAGACCGTTTATGCCCGGGAGGACTGAGGTTGAACAGCTTCACATGATCTTCAAACTTTGTGGTTCTCCTTCAGAGGATTACTTGATGAAAATGAAGCTAAGGACAACCTACCTTCCGCCAAATCATTATAAAGCTAATTTTGAAGATTTCTGCCAGGGATTTCCTTCCTCTTCCCTAGGTCTCTTGACTACACTCCTTCATCTAGACCCTGCATGTCGCGGTAGTGCTGCCTCTGCTCTTGAAAGTGAATTCTTCAAATCGACACCATTAGCATGTGACTTCTCAGCGTTACCAGTAATCTACAAGGAAGAGGATGAACGCTCACAAACCAAGAGACGCAAAAGACGCAAAAGCCAGAATAAAGAGCAAGTATCTAAAACAAACAAAAGTAATGTAAGTTTGACAGGAAAGAACCATAATGATGAACAAAGGAGGACAGATTCTGAACCATCAAAGGAGGTGAAGATGATGGAACAAAACATGCAAAGTCAAGAAAAGGGGAGTAGTGGAAACAGCACATCGTCACAGGTTATGGAAGAAAGGAGCATGAGCACATCTATATCTCTATCCCCGATTTTTATATCTACTGGGAGGAAATCCCCAAAGACTGAGGGATACCCTAATGCCCTTAAGAACATAAGGAACTACACTCTTTTACAGGCCTCTATCATTGATATAATGAATCGCAATGAAGCCAACGAACTTGGTCCGTTGCATAGGTCATTTTCTTCGTTGGACATTCGAGTTGATCTTGAGAAGCTACCAAGTCTCTATGGACCAAATAAGAACTTAGGCTTTGGAATTTGA 1911 0.4343 MGCVNSTSSPPSSLNRNLERLKRDNAYATPKRCSASASAGKPPLSHEDSSRKHSSVSKQAEDTSTNKMGLRVKLIRDEQHHSYKTSSSGGPVDRDHRDIKEKEKEKEKGVANTNATIDEVNSEVGNVSSKSEEIKKKNNIGTYYELVDGWPKWLVDNIPQQVLDGLVPKSAHSYEKLGKVGRGTYSNVYKARDKDTGKIVALKKVRFDTSDSESVKFMAREIRILQKLDHPNVIKLRGLATSRMQYSLYLVFDYMQADLTRIISRPGEELTEPQIKCYMQQLLYGLRHCHEKGVIHRDIKPSNLLIDKRGVLKIADFGLASTKHQGPFTNRVVTLWYRAPELLLGSTDYGFGIDLWSAGCLLAEMIVRRPFMPGRTEVEQLHMIFKLCGSPSEDYLMKMKLRTTYLPPNHYKANFEDFCQGFPSSSLGLLTTLLHLDPACRGSAASALESEFFKSTPLACDFSALPVIYKEEDERSQTKRRKRRKSQNKEQVSKTNKSNVSLTGKNHNDEQRRTDSEPSKEVKMMEQNMQSQEKGSSGNSTSSQVMEERSMSTSISLSPIFISTGRKSPKTEGYPNALKNIRNYTLLQASIIDIMNRNEANELGPLHRSFSSLDIRVDLEKLPSLYGPNKNLGFGI* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2483 636 Gene3D Phosphorylase Kinase; domain 1 164 256 - -
Dod04g2483 636 Gene3D Transferase(Phosphotransferase) domain 1 257 497 - -
Dod04g2483 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
Dod04g2483 636 ProSitePatterns Protein kinases ATP-binding region signature. 180 203 IPR017441 GO:0005524
Dod04g2483 636 PANTHER CYCLIN-DEPENDENT KINASE 125 594 - -
Dod04g2483 636 ProSiteProfiles Protein kinase domain profile. 174 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2483 636 PANTHER CELL DIVISION PROTEIN KINASE 125 594 - -
Dod04g2483 636 MobiDBLite consensus disorder prediction 523 552 - -
Dod04g2483 636 SUPERFAMILY Protein kinase-like (PK-like) 170 458 IPR011009 -
Dod04g2483 636 SMART serkin_6 174 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2483 636 Pfam Protein kinase domain 174 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2483 636 MobiDBLite consensus disorder prediction 1 96 - -
Dod04g2483 636 MobiDBLite consensus disorder prediction 506 522 - -
Dod04g2483 636 MobiDBLite consensus disorder prediction 1 16 - -
Dod04g2483 636 MobiDBLite consensus disorder prediction 472 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2483 Dod-Chr4 48669363 48678785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2483 169 494 Core Cell Cycle Gene Families AT5G10270 46.686 4.98e-96 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod04g2483 Pkinase 8.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2483 K08819 - gmx:102667260 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2483 04 48669363 48678785 Dod04g2483 04 48669363 48678785 ECH