Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2477 ATGAAACCCTTACACACCACCCTCATCAGCAACTACTACTCACTCTTCCTCACTTTCCTCTCCCTCCAGTCTTCCCTTATTTCTTGTTCTTCTTCAGACACAACAACAACACTGCAACAACTCATAAGCTTCAAAACCTCTCTCCCGAACCCATCCCTTCTCCCCACGTGGCTCCCAACAAAGCACCCATGCTCCTTCACAGGAATCACCTGCACGCGTTCCCACGTCACCTCCATAGACCTCACCTCCACCCCTCTCGCCACAAACTTCACAGTAATCTCCACCACACTCCTCACACTCCAGACCCTCCAATCCCTCACTCTCTCTTCCACCAACCTCTCCGGTCCCCTCTCTCCTCTCTCCACCTGCTCCGCCACGCTAACGGCCCTCGACCTCTCCCGTAACGCCCTCAACGGCCAGCTCTCGCAGCTCAACCACCTCACACTCTGTTCCACCTTGCAGTTCCTCAACCTCTCCGACAACAACCTCGTTTCCTCCGAAAAGTTGTCACGGTCAAAAAAAGAAGCTTGGAATCTTCGGGTGCTGGATCTCTCTGACAACCAGCTTTCGGGTCCTGAAGTTATCCCTTGGATACTCTCTTCGGGCGGCGACAAGATTCAACACTTGGCTCTCAAGGGAAACAGGGTGACCGGAGAAACAGATTTTTCCGGTTGCAGGAGCTTGCAGCGTTTGGACATTTCGGCGAATAATTTCTCTGCGGTTGTTCCTTCGTTCGGGGAGTGTTCTTCGTTGGAGTACGTTGATATCTCCGCGAACAAGTTTTCCGGCGACATTTCCGGTGCTCTCTCCGGTTGCCGGAACCTCAGCTATTTGAATGCTTCGAGCAACCAGTTTTCCGGCGATGTTCCTTTGCTTCCCGCTGGGAACTTGAGGTTTCTCTACCTCGCCGGGAACAATTTCCGGGCGGATATTCCGGCGAGGCTCGCCGGGCTATGCCCGAGCCTCGTCGAGCTCGATGTCTCGTCGAACAACCTCTCCGGCACGGTTCCGGAAGAGTTCAGCGCTTGTTCTTCGTTGGAGTCGTTTGTTTTGTCTCGGAACAAGTTTTCCGGTGAGTTTCCGGTGGAGACCTTCGCCGGAATGACAAGCCTGAAGAGGCTGTTGCTTTCGTTCAACGAGTTTTTGGGGCCATTGCCGGAGTCCTTGTCGAAGCTCGTGAGTTTGGAGTCTTTGCATTTGGGTTCTAACAACTTTTCTGGTTCAATACCAAGAGGGCTATGTGAGGATCCTAGTAACAGTTTGAAGGAACTGTTCTTGCAGAATAATATGTTGTCTGGTTTTATTCCAGCTACAATCAGCAGTTGTTCACAGCTTGTTGCTTTGGATTTGAGTTTCAACTACTTGAAGGGTACTATCCCTTCGAGTTTAGGGTCACTTTTGAAGCTCCGTGATTTGATCCTTTGGCTGAACCAGCTCAGTGGGGAGATACCACAAGAGTTAATGTATGTTAAGACCCTTGAGAATTTGATTCTTGACTTCAATGAGTTGAGTGGGGAGATTCCTTCTGGCCTAAGCAATTGCAGGAATTTGAGTTGGCTCTCTTTGTCGAATAACCGGCTGACCGGGGAGATTCCAGCCTGGATCGGCCGGCTGCCGAATCTGGCTATCCTTAAACTGAGTAATAACTCCTTGTCTGGGAGGATTCCGCCGGAGCTCGGTGATTGCCGCAGCTTGATTTGGTTGGATTTGAATACTAATATGCTGAGTGGTTCGATTCCTGCTGAGTTGTTCAAGCAATCTGGCAAGATTGCAGTTAATTTTATTAGTGGGAAAACTTATGTGTACGTTAAGAATGATGGTACTAAGGAGTTCCATGGGGCAGGTAGTTTGCTGGAGTTTGCAGGGATCAGAGAGGAGCAGTTGAGCAGGATTTCAAGTAGGAACTCATGGAATGTCAGCAGAGTTTATCAAGGTAACTTAGGTAAGCTCCTGCCGCCTACGTTTAACCATAATGGCTCTATGATTTTTGTGGATTTTTCGCACAATATGTTGTCCGGTACTATTCCTAAGGAGCTTGGGAGCATGTACTATTTAGACATTTTGAATTTGGGCCACAACAATATATCTGGGAACATCCCACAAGAGCTTGGAATGTTGAAGAATCTTGGCATACTTGATCTCTCCAGCAACAGGCTTGAAGGACAAATTCCACCAAGCTTGACACACCTTTCCTTTCTCACAGAAATTGATTTGTCAAACAACTACCTGTCTGGATCGGTTCCTGCGTCCGGGCAATTTATTACTTTTCCGGCTAGCAGGTTCCGGAATAATTCTGGTCTCTGCGGTTTTCCTCTAGTTCCATGTGGAGCAGACTCAGGATCTGGTGTAAATGCCCAACATCATAGGTCTCATAGGAGACAGTTAACTCTTGCAGGGAATGTGGCCATGGGATTGCTATCCTCCCTTTTCTGCCTCTTTGTTTTAGTTATAATTGCCATTGAGACCAGAAAGAGGAGAAAGAAAAAGGAACCTGCCCTCGATGCCTTCATTGACAGTCGATCTCATTCGGGGACAGCCAATGTAGGCTGGAAGCTGATCACTGCTAGGGAAGCACACAGCATAAATCTTGAAACATTCGCGCATCCCCTTCGGAAGCTTACATTTGCAGATCTGCTTGAAGCTACCAACGGCTTCCATGACGACAGCATTATTGGGTCTGGTGGTTTTGGTGTTGTATACAAGGCCCAATTGAAGGATGGAAGTGTTGTGGCCATCAAGAAACTGATACATATCAGTGGCCAAGGGGACAGGGAATTCACAGCTGAAATGGAAACCATAGGGAGAATCAGACACCGGAACCTTGTTCCTCTTCTCGGCTACTGCAAGGTTGGAGAAGAGAGGCTCTTGGTTTATGAATACATGAAGTATGGAAGCCTAGACATGTTGCATGACCAGAAGAAAGCTAAGATCAAGCTGAACTGGGCAGCAAGGAAGAAAATTGCCATTGGGGCTGCCAGGGGATTGGCTTTTCTTCACGACAATTGTACCCCAATAATCATTCATAGAGACATGAAATCAAGCAATGTGTTGCTTGATGAAAATTTGGAAGCCAGGGTTGCTGATTTTGGAATGGCCAGGCTCATGAGTACTGTAGATACCCATTTAAGTGTTAGCACTCTAGCGGGAACACCTGGCTATGTTCCTCCTGAATACTATCACAGCTTTAGATGTTCCACTGAAGGCGATGTGTATAGTTATGGTGTAGTCTTGTTGGAGCTTCTTACAGGGAAAAGGGCAACGGATTCAACTGATTTTGGTGATGACAATCTTGTGGGGTGGGTTAAACAGCATGCCAAACTGAAGAAAAGTGATGTTTTTGACCCTGAGCTCAGGAAAGAGGACCCGAGTCCTGAACTTGAGCTTGTACAATACTTAAACGTTGCCTTTGCTTGCTTGGATTGTCGACCTCGGAAGCGTCCCACAATGAATCAAGTCGTGGCCAAGTTTAAAGCAATCCAAGCGGGGTCTGGTGTGGATTCCCAGTCTACTATTGTCACTAAAGATGTAGGTTTTGGTGCAGTTGAAATGGTAGAGACGACCATAAAAGAAACCCCTGAGTTAAGCAAGCAGTAG 3594 0.4772 MKPLHTTLISNYYSLFLTFLSLQSSLISCSSSDTTTTLQQLISFKTSLPNPSLLPTWLPTKHPCSFTGITCTRSHVTSIDLTSTPLATNFTVISTTLLTLQTLQSLTLSSTNLSGPLSPLSTCSATLTALDLSRNALNGQLSQLNHLTLCSTLQFLNLSDNNLVSSEKLSRSKKEAWNLRVLDLSDNQLSGPEVIPWILSSGGDKIQHLALKGNRVTGETDFSGCRSLQRLDISANNFSAVVPSFGECSSLEYVDISANKFSGDISGALSGCRNLSYLNASSNQFSGDVPLLPAGNLRFLYLAGNNFRADIPARLAGLCPSLVELDVSSNNLSGTVPEEFSACSSLESFVLSRNKFSGEFPVETFAGMTSLKRLLLSFNEFLGPLPESLSKLVSLESLHLGSNNFSGSIPRGLCEDPSNSLKELFLQNNMLSGFIPATISSCSQLVALDLSFNYLKGTIPSSLGSLLKLRDLILWLNQLSGEIPQELMYVKTLENLILDFNELSGEIPSGLSNCRNLSWLSLSNNRLTGEIPAWIGRLPNLAILKLSNNSLSGRIPPELGDCRSLIWLDLNTNMLSGSIPAELFKQSGKIAVNFISGKTYVYVKNDGTKEFHGAGSLLEFAGIREEQLSRISSRNSWNVSRVYQGNLGKLLPPTFNHNGSMIFVDFSHNMLSGTIPKELGSMYYLDILNLGHNNISGNIPQELGMLKNLGILDLSSNRLEGQIPPSLTHLSFLTEIDLSNNYLSGSVPASGQFITFPASRFRNNSGLCGFPLVPCGADSGSGVNAQHHRSHRRQLTLAGNVAMGLLSSLFCLFVLVIIAIETRKRRKKKEPALDAFIDSRSHSGTANVGWKLITAREAHSINLETFAHPLRKLTFADLLEATNGFHDDSIIGSGGFGVVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGRIRHRNLVPLLGYCKVGEERLLVYEYMKYGSLDMLHDQKKAKIKLNWAARKKIAIGAARGLAFLHDNCTPIIIHRDMKSSNVLLDENLEARVADFGMARLMSTVDTHLSVSTLAGTPGYVPPEYYHSFRCSTEGDVYSYGVVLLELLTGKRATDSTDFGDDNLVGWVKQHAKLKKSDVFDPELRKEDPSPELELVQYLNVAFACLDCRPRKRPTMNQVVAKFKAIQAGSGVDSQSTIVTKDVGFGAVEMVETTIKETPELSKQ* 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2477 1197 Pfam Leucine rich repeat N-terminal domain 39 71 IPR013210 -
Dod04g2477 1197 Gene3D Transferase(Phosphotransferase) domain 1 963 1161 - -
Dod04g2477 1197 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1006 1018 IPR008271 GO:0004672|GO:0006468
Dod04g2477 1197 CDD STKc_IRAK 891 1159 - -
Dod04g2477 1197 Pfam Protein kinase domain 885 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2477 1197 ProSitePatterns Protein kinases ATP-binding region signature. 891 914 IPR017441 GO:0005524
Dod04g2477 1197 Gene3D Ribonuclease Inhibitor 41 775 IPR032675 -
Dod04g2477 1197 SMART LRR_typ_2 225 248 IPR003591 -
Dod04g2477 1197 SMART LRR_typ_2 730 753 IPR003591 -
Dod04g2477 1197 SMART LRR_typ_2 490 514 IPR003591 -
Dod04g2477 1197 SMART LRR_typ_2 392 416 IPR003591 -
Dod04g2477 1197 SMART LRR_typ_2 706 729 IPR003591 -
Dod04g2477 1197 SMART LRR_typ_2 319 343 IPR003591 -
Dod04g2477 1197 SMART LRR_typ_2 538 562 IPR003591 -
Dod04g2477 1197 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Dod04g2477 1197 ProSiteProfiles Protein kinase domain profile. 885 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2477 1197 ProSiteProfiles Leucine-rich repeat profile. 178 199 IPR001611 GO:0005515
Dod04g2477 1197 PANTHER SYSTEMIN RECEPTOR SR160 14 1171 - -
Dod04g2477 1197 ProSiteProfiles Leucine-rich repeat profile. 152 173 IPR001611 GO:0005515
Dod04g2477 1197 SUPERFAMILY RNI-like 265 582 - -
Dod04g2477 1197 SMART serkin_6 885 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2477 1197 Gene3D Phosphorylase Kinase; domain 1 847 960 - -
Dod04g2477 1197 SUPERFAMILY L domain-like 646 776 - -
Dod04g2477 1197 SUPERFAMILY Protein kinase-like (PK-like) 863 1154 IPR011009 -
Dod04g2477 1197 PRINTS Leucine-rich repeat signature 706 719 - -
Dod04g2477 1197 PRINTS Leucine-rich repeat signature 179 192 - -
Dod04g2477 1197 Pfam Brassinosteroid receptor island domain 588 647 IPR045381 -
Dod04g2477 1197 Pfam Leucine rich repeat 515 575 IPR001611 GO:0005515
Dod04g2477 1197 Pfam Leucine rich repeat 226 285 IPR001611 GO:0005515
Dod04g2477 1197 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 1171 - -
Dod04g2477 1197 SUPERFAMILY RNI-like 58 312 - -
Dod04g2477 1197 Gene3D - 593 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2477 Dod-Chr4 48608385 48612707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2477 38 1193 Receptor kinase-like Gene Family AT4G39400 64.893 0.0 1432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dod04g2477 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2477 K13415 - gmx:100799772 1594.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2477 04 48608385 48612707 Dod04g2477 04 48608385 48612707 ECH