Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2476 ATGATGTCGACAACTTCTCAAACTATTGTTAACCATAGCTTGTTCGGGGAGCAGGATCAGATGCCTACGCAGATGGGGTTTCTTCCTCTCCCAACAAACATGATCTTCCCTCCTTTGGGTTGCCATCAACCCTTGAAACCCTTCAGCTCCATATCTCCTAATTCACTCGCATCTGATCAAGCTGATTCAACTTCAAACTTAACCGCAGAAACCCTACTCACAACCACTGCTCAAAAATCAAGAGTAGACCTCACTTCTAGCTTTGGAGGAGCTCAATTCCTATCCTTGAACAGATCAAGTATAAATCCATGGGCATCCGGTGGAGAAGTAGCCGACTGCTTCAGCAGTAAAAGAAGTGGGGTAGATGATCATCATTTAGGGGTTTCTCACATAAAGATGAAGAAAATGAAGGCAAGAAGGAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACCATGAGTGATGTGGATGTGTTGGACGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTCAAGAACACGCAGCACCCCAGAAGCTATTACCGCTGCACACAAGATAATTGCCGCGTAAAGAAACGCGTAGAGCGCTTAGCGGAGGACCCAAGGATGGTCATAACAACATATGAAGGGAGACATGCACACTCTCCATCGAATGATCTTGAAGAGTCTCAAACTCCATCTCAACTTAGTAACTTCTTCTGGTAG 708 0.4576 MMSTTSQTIVNHSLFGEQDQMPTQMGFLPLPTNMIFPPLGCHQPLKPFSSISPNSLASDQADSTSNLTAETLLTTTAQKSRVDLTSSFGGAQFLSLNRSSINPWASGGEVADCFSSKRSGVDDHHLGVSHIKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLEESQTPSQLSNFFW* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2476 235 ProSiteProfiles WRKY domain profile. 153 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2476 235 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 60 226 - -
Dod04g2476 235 SUPERFAMILY WRKY DNA-binding domain 150 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g2476 235 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 60 226 IPR044810 GO:0003700
Dod04g2476 235 Gene3D WRKY domain 145 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g2476 235 MobiDBLite consensus disorder prediction 210 235 - -
Dod04g2476 235 MobiDBLite consensus disorder prediction 220 235 - -
Dod04g2476 235 Pfam WRKY DNA -binding domain 159 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2476 235 SMART WRKY_cls 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2476 Dod-Chr4 48600946 48603681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2476 128 235 WRKY Transcription Factor Family AT4G39410 79.646 6.93e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod04g2476 WRKY 6.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2476 - - gmx:732585 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2476 04 48600946 48603681 Dod04g2476 04 48600946 48603681 ECH