Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2474 ATGGGTCCCTTTGCTCTCCCCGTTATGGTGCAAGACACTGCCATTTCATCATCATCATCATCAGATGGCAAAAAGGAATTCGAAATTCGCCAAGCATTTGAAAAGTGTTGCAGTGTTGACACTGATGCTTGTACTAAGAGAAAACAAAACTTGCAGCTGAGAAATTCTTTTGCATCAGTTAGCATGGGAGAGCATAAGCCCTTTGACTTCTTACGCACTTTATTTGAGGGTGTTATTGCAGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCAATTGACACTATAAAAACACGTCTCCAGGCTGCTCGTGGAGGAGAAAAACTAATACTGAAGGGCCTTTATTCTGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCTGCTTTATTTGTTGGAGTTTATGAACCTATAAAGCAAAAATTATTGAGGATATTTCCTGGAAGTCTGAGTGCTTTTGCTCATTTGACTGCAGGTGCCATAGGGGGTATTGCTGCTTCACTGATTCGCGTTCCAACAGAGGTTGTTAAGCAGCGAATGCAAACTGGGCAATTTATTTCAGCTTCTGGTGCGGTTCGCTTCATTGTTGCTAAGGAGGGTTTTAAAGGACTTTATGCTGGGTATGGATCTTTTTTATTGCGGGATTTGCCCTTTGATGCGATTCAGTTCTGCATCTATGAGCAGATTAGAATAGGTTACATGCTTGCGGCACGACGAAATCTGAATGATCCAGAAAATGCAATTATTGGTGCATTTGCAGGTGCACTGACTGGAGCTATAACTACTCCCCTTGATGTCATCAAGACAAGGTTAATGGTCCAGGGATCTGCAAACCAATATAAGGGAATTGTAGATTGTGTTCAAACCATTATTAAGGAAGAGGGACCTGGTGCATTATTGAAGGGTGTTGGGCCTCGAGTACTGTGGATAGGCATAGGTGGTTCAATATTCTTCGGTGTCCTTGAGGGTACAAAACGTTTTCTAGCTGAGAGGCGTCCCACACATGCTCAGCCCTCAAACTCGGAAAAAAGTGATTGA 1047 0.4336 MGPFALPVMVQDTAISSSSSSDGKKEFEIRQAFEKCCSVDTDACTKRKQNLQLRNSFASVSMGEHKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPGSLSAFAHLTAGAIGGIAASLIRVPTEVVKQRMQTGQFISASGAVRFIVAKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIVDCVQTIIKEEGPGALLKGVGPRVLWIGIGGSIFFGVLEGTKRFLAERRPTHAQPSNSEKSD* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2474 348 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 38 340 - -
Dod04g2474 348 PRINTS Mitochondrial carrier protein signature 77 90 IPR002067 GO:0055085
Dod04g2474 348 PRINTS Mitochondrial carrier protein signature 90 104 IPR002067 GO:0055085
Dod04g2474 348 PRINTS Mitochondrial carrier protein signature 253 275 IPR002067 GO:0055085
Dod04g2474 348 PRINTS Mitochondrial carrier protein signature 208 226 IPR002067 GO:0055085
Dod04g2474 348 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 38 340 - -
Dod04g2474 348 SUPERFAMILY Mitochondrial carrier 75 325 IPR023395 -
Dod04g2474 348 Pfam Mitochondrial carrier protein 248 333 IPR018108 -
Dod04g2474 348 Pfam Mitochondrial carrier protein 152 234 IPR018108 -
Dod04g2474 348 Pfam Mitochondrial carrier protein 74 108 IPR018108 -
Dod04g2474 348 Gene3D Mitochondrial carrier domain 67 345 IPR023395 -
Dod04g2474 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 330 IPR018108 -
Dod04g2474 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 144 IPR018108 -
Dod04g2474 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 153 235 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2474 Dod-Chr4 48542985 48554291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2474 153 336 Chloroplast and Mitochondria Gene Families AT1G07030 31.217 4.60e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2474 K15111 - gmx:100811130 538.88