Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod04g2466 | ATGGAATACTATTTTGTGAACCCTCATCCAAACCCCGATTACGCTCACTCTGCCATGAACATGGCTCCATCATCCTCTGAATTCGTGTTATCCGATTTTCTCATGCTTGATGATTGTGATATTGTTGGTGTTGATCATCATCATCATCAAGAGTGTCCGTCACAAAGTACTGATTCATCGGAGATGGCAACTTTCAGCGACGTCACTCACGGTCACGGCTTCAATAATGGTGCAACCTCTGGCAACAATAACATAAAATGCAAAAGTGGGTGTAAGGTAGAAGTGAGTTCAAGGATTGCGTTTAGGACGAGATCGGAGCTTGACGTTATGGATGATGGATACAAGTGGAGGAAGTACGGAAAAAAGTCCGTGAAGAACAGTCCGAATCTGAGGAACTACTACAAGTGTTCAAGTGAAGGATGCGGTGTGAAGAAAAGGGTGGAAAGGGATAGAGACGACTCTAGCTATGTGATAACAACTTATGAAGGTGTGCACAATCATCCAAGCCCGTTTACTGCATACTAA | 525 | 0.4362 | MEYYFVNPHPNPDYAHSAMNMAPSSSEFVLSDFLMLDDCDIVGVDHHHHQECPSQSTDSSEMATFSDVTHGHGFNNGATSGNNNIKCKSGCKVEVSSRIAFRTRSELDVMDDGYKWRKYGKKSVKNSPNLRNYYKCSSEGCGVKKRVERDRDDSSYVITTYEGVHNHPSPFTAY* | 175 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod04g2466 | 174 | ProSiteProfiles | WRKY domain profile. | 105 | 170 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dod04g2466 | 174 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 10 | 171 | IPR044810 | GO:0003700 | |
Dod04g2466 | 174 | Gene3D | WRKY domain | 94 | 171 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Dod04g2466 | 174 | PANTHER | WRKY TRANSCRIPTION FACTOR 50-RELATED | 10 | 171 | - | - | |
Dod04g2466 | 174 | SUPERFAMILY | WRKY DNA-binding domain | 102 | 170 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Dod04g2466 | 174 | SMART | WRKY_cls | 110 | 169 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dod04g2466 | 174 | Pfam | WRKY DNA -binding domain | 111 | 168 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod04g2466 | Dod-Chr4 | 48471834 | 48474917 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod04g2466 | 7 | 174 | WRKY Transcription Factor Family | AT5G64810 | 50.575 | 5.34e-42 | 137 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Dod04g2466 | WRKY | 2.9e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod04g2466 | - | - | gmx:100500248 | 233.417 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod04g2466 | 04 | 48471834 | 48474917 | Dod04g2466 | 04 | 48471834 | 48474917 | ECH |