Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2466 ATGGAATACTATTTTGTGAACCCTCATCCAAACCCCGATTACGCTCACTCTGCCATGAACATGGCTCCATCATCCTCTGAATTCGTGTTATCCGATTTTCTCATGCTTGATGATTGTGATATTGTTGGTGTTGATCATCATCATCATCAAGAGTGTCCGTCACAAAGTACTGATTCATCGGAGATGGCAACTTTCAGCGACGTCACTCACGGTCACGGCTTCAATAATGGTGCAACCTCTGGCAACAATAACATAAAATGCAAAAGTGGGTGTAAGGTAGAAGTGAGTTCAAGGATTGCGTTTAGGACGAGATCGGAGCTTGACGTTATGGATGATGGATACAAGTGGAGGAAGTACGGAAAAAAGTCCGTGAAGAACAGTCCGAATCTGAGGAACTACTACAAGTGTTCAAGTGAAGGATGCGGTGTGAAGAAAAGGGTGGAAAGGGATAGAGACGACTCTAGCTATGTGATAACAACTTATGAAGGTGTGCACAATCATCCAAGCCCGTTTACTGCATACTAA 525 0.4362 MEYYFVNPHPNPDYAHSAMNMAPSSSEFVLSDFLMLDDCDIVGVDHHHHQECPSQSTDSSEMATFSDVTHGHGFNNGATSGNNNIKCKSGCKVEVSSRIAFRTRSELDVMDDGYKWRKYGKKSVKNSPNLRNYYKCSSEGCGVKKRVERDRDDSSYVITTYEGVHNHPSPFTAY* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2466 174 ProSiteProfiles WRKY domain profile. 105 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2466 174 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 171 IPR044810 GO:0003700
Dod04g2466 174 Gene3D WRKY domain 94 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g2466 174 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 10 171 - -
Dod04g2466 174 SUPERFAMILY WRKY DNA-binding domain 102 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g2466 174 SMART WRKY_cls 110 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2466 174 Pfam WRKY DNA -binding domain 111 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2466 Dod-Chr4 48471834 48474917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2466 7 174 WRKY Transcription Factor Family AT5G64810 50.575 5.34e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod04g2466 WRKY 2.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2466 - - gmx:100500248 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2466 04 48471834 48474917 Dod04g2466 04 48471834 48474917 ECH