Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2461 ATGGCAATTAGCATTGAATCTTGTTACACGGTGGTTCCTAGTGAGGCTACTCCAGATGGTTGTCTGTTGTTGTCTGAAAGTGAGCAAATCAAAGGTCATTATCATTCACTCACAATCTACATCTACACTGCAAATAATCACAATGCTGAAATCGGCAACGTGATTGACACAATGAAAGACTCTCTTGGCAAGATCTTAGTCCACTGCTACCCACTCGCTGGCCGGCTACGCATGACTGAAGGTGGAAGATTGCAAGTGGACTGCAACGCCAAGGGTGCAATGCTCTTGGAAGCTGAATCCACAAGATCACTGCATGATTACGGTGACTTTGAACCTAACGACACCATCAAAGACCTCATGCCAAAGATTCACTTGCGGTGGCCTTTGTGTTGGGTTGCTCTTTCTAATGTCATTGCTGATGGACCTACTGGAACTTTGTTCGTTAACACTTGGGCTAAGCTAGCCCGAGGAAGCACACTTGAAGAAGATGAGAAGCCATTTCTGAATAGAACAACGGTTCTAGGATCATCATCTCAGACAAGCTTCATGGCATCGTCACAACGATTTGACCATCGTGAATTCAAGCCACTGCCACTCGTGCTTGGTAGCTCTGACACCACAGCGGAGCGCAAGAAGGAGACAGATCTTGCAATGTTGAAACTCACAAAGGAGATGGTGGAGAAGCTGAAGAAGAAAGCCAATGATGAGTTGATGATGGAATATGATGAGACGACAATGGAGCAACAACGTCGACCTTATAGCAGATATGAAAGCATTGCTGCTCATATTTGGAGGTGTGCATGCAAGGCACGCAAAAGTGATGATAATCAACCAACGGTGATTCACATTGTTGCTGGCACTCGGAATAGAGTGAAGCCACCTCTCCCTCTAAACTATTTTGGGAACGCCACACATCCAACTGTGACACCCACGTGCCTCAGTGGTGACATTGTGTCCAAGCCCTTGAGCTATGGGGCGCATAAGATAGGGGAAGCGGTTGGAGTTCTAACAGATGAGTACTTGAAATCCGCTTTTGATTTTATTAGGAGGCAGGACGATATGAGAAGGCTTAGGCCATCCTTCAACAGTGAAGGCTGCGTAGAAGCACCATATCTTGGGAATCCAAACCTCAACATTTGGAGCTGGATGAGTAATATGCCAATGTATGGGCCAGATTTTGGGTGGGGAAGGCCAGTTTATATGGGTCCAGGTGTTGTAGGTGGAGATGGCAGGGCATTCATCATGCCAAGTGCAGCAGGGGATGGGTCTCTTTCCATTGCCATTCGTTTGCAGACTGCTTTTGTTGAAGCATTCAAGAAGTTCTTCTACGATGACATATGA 1341 0.4638 MAISIESCYTVVPSEATPDGCLLLSESEQIKGHYHSLTIYIYTANNHNAEIGNVIDTMKDSLGKILVHCYPLAGRLRMTEGGRLQVDCNAKGAMLLEAESTRSLHDYGDFEPNDTIKDLMPKIHLRWPLCWVALSNVIADGPTGTLFVNTWAKLARGSTLEEDEKPFLNRTTVLGSSSQTSFMASSQRFDHREFKPLPLVLGSSDTTAERKKETDLAMLKLTKEMVEKLKKKANDELMMEYDETTMEQQRRPYSRYESIAAHIWRCACKARKSDDNQPTVIHIVAGTRNRVKPPLPLNYFGNATHPTVTPTCLSGDIVSKPLSYGAHKIGEAVGVLTDEYLKSAFDFIRRQDDMRRLRPSFNSEGCVEAPYLGNPNLNIWSWMSNMPMYGPDFGWGRPVYMGPGVVGGDGRAFIMPSAAGDGSLSIAIRLQTAFVEAFKKFFYDDI* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2461 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 132 446 - -
Dod04g2461 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 129 - -
Dod04g2461 446 Coils Coil 216 236 - -
Dod04g2461 446 Pfam Transferase family 2 125 - -
Dod04g2461 446 Pfam Transferase family 133 443 - -
Dod04g2461 446 Gene3D - 202 444 IPR023213 -
Dod04g2461 446 Gene3D - 1 196 IPR023213 -
Dod04g2461 446 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 132 446 - -
Dod04g2461 446 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 7 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2461 Dod-Chr4 48435059 48436529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2461 1 444 Monolignol Biosynthesis Gene Families AT5G48930 33.262 4.74e-82 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2461 K13065 - gmx:100779652 553.132