Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2443 ATGAATTCTCCTACTTCACAGTTTGTTTCCTCAAGAAGGATGGGAGTGTATGATCCAATCAACCAAATTACAACTATGTGGGAAGAAAATTTCAGAAACAATGGGAATTTAAGTGCATCCACCTTCTTAATTGATGAGGCGGACATGAAATTAGATAATCAGTCAGAGGATGCTTCTCATGGAATGCCCGGAACATCTAAACAGTATGACCATGAAGCTAACAGAATTACAGATAAGATACAAAGACGTCTTGCACAAAATCGAGAGGCTGCTCGCAAGAGTCGTTTGCGGAAAAAGGCCTATGTGCAGCAGTTAGAATCATATCGTTTGAAGCTGATGCAGTTAGAGCAAGAGCTTGGTCATGCAAGACAACAGGGATTATATATTGGTGGTGCATTGGGTTCTAATAGTTTGGGTTTTGCTGGCTCTGTAAATTCAGGAATAACAACGTTTGAGATGGAGTATGGTCATTGGCAAGAAGAGCAAAATAGACAAACATTGGAACTGAGAAGTGCTTTAAGTTCTCATATTGGTGACATAGAGCTGGGGACGCTCGTAGATGGCATAATGAACCACTATTTCAAACTCTTCAGCATGAAATCTGCCGCTGCAAGAGCCGATGCTTTCTATGTTATGTCTGGTATGTGGAAAACGACAGCTGAACGTTTTTTCTTCTGGATTGGAGGCTTTCGCCCCTCTGAAATTCTAAAGGTTCTGGTCCATCGGATTGAACCAATGACAGAGCAACAACGGTTTGATGTAAGTAACCTTGGAAAATCTTGTCAGCAAGCAGAAGATGCCCTCTCACAAGGTATGGACAAACTCCAGCAAATGGTTTCAGAAGCCGTGGCAGCAGGACAACTCGTTGAAGAAACTCACATTCCACAGATGTCTACTGCAATGGAGAGGTTGGAGGCTCTGGTGAGCTTTGTGAACCAGGTTAGTAAGTTGCTTCCTTTTATTGAATAG 969 0.4231 MNSPTSQFVSSRRMGVYDPINQITTMWEENFRNNGNLSASTFLIDEADMKLDNQSEDASHGMPGTSKQYDHEANRITDKIQRRLAQNREAARKSRLRKKAYVQQLESYRLKLMQLEQELGHARQQGLYIGGALGSNSLGFAGSVNSGITTFEMEYGHWQEEQNRQTLELRSALSSHIGDIELGTLVDGIMNHYFKLFSMKSAAARADAFYVMSGMWKTTAERFFFWIGGFRPSEILKVLVHRIEPMTEQQRFDVSNLGKSCQQAEDALSQGMDKLQQMVSEAVAAGQLVEETHIPQMSTAMERLEALVSFVNQVSKLLPFIE* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2443 322 Pfam bZIP transcription factor 78 107 IPR004827 GO:0003700|GO:0006355
Dod04g2443 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 97 IPR004827 GO:0003700|GO:0006355
Dod04g2443 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 119 IPR004827 GO:0003700|GO:0006355
Dod04g2443 322 CDD bZIP_HBP1b-like 79 131 - -
Dod04g2443 322 Gene3D - 78 126 - -
Dod04g2443 322 ProSiteProfiles DOG1 domain profile. 148 322 IPR025422 GO:0006351|GO:0043565
Dod04g2443 322 Pfam Seed dormancy control 168 240 IPR025422 GO:0006351|GO:0043565
Dod04g2443 322 SMART brlzneu 75 135 IPR004827 GO:0003700|GO:0006355
Dod04g2443 322 PANTHER TRANSCRIPTION FACTOR TGA9 1 317 - -
Dod04g2443 322 Coils Coil 98 125 - -
Dod04g2443 322 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 317 - -
Dod04g2443 322 SUPERFAMILY Leucine zipper domain 79 119 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2443 Dod-Chr4 48237477 48244024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2443 1 317 Calmodulin-binding Proteins AT5G10030 63.009 4.14e-147 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod04g2443 DOG1 1.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2443 K14431 - gmx:100780003 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2443 04 48237477 48244024 Dod04g2443 04 48237477 48244024 ECH
Dod04g2443 04 48237477 48244024 Dod04g0435 04 6013657 6018813 PCT