Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2441 ATGACGGATCACTTAGTCTCTTCTCCTCCAATCCCTCCCCCACCCATCGACCTCGAAGCCGGTTCCTCGGAACAAATCCAATGCCGAATTTGCCTCGAAACTGACGGTAGAGATTTCATTGCTCCTTGCAAGTGCAAAGGTACATCAAAATATGTGCATCGGGAATGTTTGGATCATTGGCGAGCGGTTAAGGAAGGGTTTGCATTTGCTCACTGCACTACTTGCAAGGCTCCTTATCATTTGCGTGTTCACGGTGCTGCTGATAGGAAATGGCGTACCTTGAAATTTCGGTTTTTTGTCACCAGAGACATTTTGTTTATATTTTTGGCAGTTCAGCTTGTTATTGCCTTACTGGCATATTTGGTTTATCTAATTGATGGTTACCAGCAATATTGGCTTCGTCTTGTTTGGGGTTTTGATAATGAGCTGAGCTTTTACTACATATGTGGAGCTCTCTTGTTTTTTGTGTTGCTTGGGTTATCTGGATGCTTCGTTACTTGTTATGATCGAAGAGTTCGCAATGATTTGGTTCAACCTTGTCGAGAAATCTGTCTTTGTTGCTGTCATCCTGGAGTCTGTGCAGACTGTCATTTGCCGGGTACACTTTGTATGTGGACTGATTGCACTGCATGCTTTGAGAGTTGTGGAACTATGGCAACTGAATGTGGTGGTTGCATGGGAGGTGCTGGAGAAGCAGGGCTACCATTATTATTCGTAATGGCTTTAATTTTTCTGGGCCTCTTTACCCTAATTGGGATATTTTACAGTGTATTAGTGGCTACCATGGTAGGACAACGAATATGGCAACGTCATTATCACATACTTGCAAAAAGGATGCTAACCAAGGAGTATGTCGTTGAGGACATTGATGGAGAGATGTCAGGGTCTGATTGGTCTCCTCCATCTCTCCCACCAGAACATGTTCAGCAGCTGAAAACACTGGGCCTCCTATGA 954 0.4413 MTDHLVSSPPIPPPPIDLEAGSSEQIQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYHLRVHGAADRKWRTLKFRFFVTRDILFIFLAVQLVIALLAYLVYLIDGYQQYWLRLVWGFDNELSFYYICGALLFFVLLGLSGCFVTCYDRRVRNDLVQPCREICLCCCHPGVCADCHLPGTLCMWTDCTACFESCGTMATECGGCMGGAGEAGLPLLFVMALIFLGLFTLIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDIDGEMSGSDWSPPSLPPEHVQQLKTLGLL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2441 317 MobiDBLite consensus disorder prediction 1 20 - -
Dod04g2441 317 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 7 317 - -
Dod04g2441 317 Pfam RING-variant domain 28 75 IPR011016 GO:0008270
Dod04g2441 317 PANTHER BNAA04G12620D PROTEIN 7 317 - -
Dod04g2441 317 SMART ringv_2 27 76 IPR011016 GO:0008270
Dod04g2441 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 88 IPR013083 -
Dod04g2441 317 CDD RING_CH-C4HC3_MARCH 28 76 - -
Dod04g2441 317 SUPERFAMILY RING/U-box 22 80 - -
Dod04g2441 317 ProSiteProfiles Zinc finger RING-CH-type profile. 20 82 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2441 Dod-Chr4 48205959 48209214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2441 1 317 C3H Transcription Factor Family AT2G22120 81.173 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2441 - - gmx:100791777 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2441 04 48205959 48209214 Dod04g2441 04 48205959 48209214 ECH
Dod04g2441 04 48205959 48209214 Dod04g0436 04 6060094 6066118 PCT