Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2436 ATGAAGATGGGATTGAGAGATCGAACCAGCAGCATGGAGGATCCGGATGGGACATTAGCCAGTGTTGCTCAATGCATTGAGCAGCTGCGCCAGCGCTCATCCTCTGTTCAAGAGAAAGAGTATTCCTTAAGGCAGTTGTTGGAGCTTATAGATATGCGTGAAAATGCTTTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTAGTTTCCCTTCTCCGGTCGGGTTCATTGAATGTAAAGATACAGGCAGCAACTGTCTTGGGCTCTCTTTGTAAAGAAAATGAGCTGAGGGTGAAAGTCTTGCTTGGAGGATGCATCCCTCCGTTGCTTGGTCTTCTAAAGTCCAGTTCCACTGAAGGGCAAATTGCTGCTGCCAAGACTGTTTATGCTGTCTCTCAAGGTGGTGTAAAAGATCATGTTGGTTCAAAAATTTTTTCTACTGAAGGAGTTGTACCAGTGCTCTGGGAGCAGCTGCGAAGGGGCTTGAAGACAGGAGATGTAGTTGAAGGTTTATTGACTGGAGCATTGAAAAATCTTTCCAGCACTACTGAGGGATTCTGGAATACAACTATACAAGCCGGAGGAGTGGACATACTAGTGAAGTTACTGGCAACGGGACAGTCAAGCACTTTAGCTAATGTGTGCTTTTTGCTTGCTTCTGTAATGATGGAGGATGCATCTGCGTGTTCAAAGGTGTTGACAGCAGATGTGACAAAACAACTCCTAAAACTATTAGGCCCTGGTAATGATGACGCTGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCTCTTTCTGCCCAGTGCAAAGAGGCAAGGAGAGAGATAGCCAATTCTAATGGTATTCCTGCTTTGATCAATGCTACCATTGCTCCTTCCAAAGAATTCATGCAGGGTGAGTGTGCTCAAGCATTACAGGAGAATGCTATGTGTGCTCTAGCAAACATATCTGGTGGGTTGTCTTATGTCATATCTAGCCTTGGTCAAAGCCTTGAATCATGCACCACAACCACCCAGACTGCGGACACATTAGGAGCATTAGCTTCAGCTCTCATGATATATGATAACAAGGCAGAATCTACAAGATCATCAGATCCTTCAGTAGTTGAGCAGACATTACTCAAACAATTCAAACCTCGCTTGCCCTTCCTTGTGCAGGAACGGACCATTGAAGCCCTTGCTAGTTTGTATGGAAATCCCATACTCTCACTTAAACTTGCAAATTCTGATGCAAAACATTTGCTTGTTGGTTTAATAACAATGGCTTCCAATGAAGTGCAAGATGAGCTTATAAAAGCTCTCTTGACACTGTGCAATGGTGAAGGCAGTCTATGGCGTGCAATCCAAGGCCGTGAAGGAGTTCAGTTGTTGATATCTCTTCTGGGGCTTTCATCAGAACAGCAGCAAGAATGTGCAGTAGCCTTGCTTTGCCTTCTGACTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGCGGTATACCTCCACTTGTTCAAATTTTGGAGACAGGATCTGCAAAAGCAAAGGAAGATTCAGCTACAATCCTTAAGAACCTGTGCAACCACAGTGAAGACATACGAGCATGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAGGATATTGCAGCAAAGACCTTAAATCATTTAATTCATAAATCCGATACTACAACTATCAGTCAGCTTACAGCGTTATTGACTAGTGATCAACCTGAATCTAAGGTTTATATTTTGGATGCTTTGAGAAGTATGCTTTCTGTTGCCCCTCTTAGTGACATTCTACGTGAAGGTAGTGCTTCCAGTGATGCATTTGATACCATGATAATGTTGCTGAGCTCTACCAACGAAGAAACTCAGGCAAAATCAGCATCAGCTCTGGCAGGAATTTTTGAATCAAGAAAAGATGTGCGTGAAAGTAGCATTGCTGTTAAAGCCCTTTGGTCAGCCATGAAACTGGTTAATGTTGAATCTGAAAGTATCCTAATGGAGTCCTCACACTGCCTGGCTTCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCTGCCATTGCTAGAGATACATTATCCCCCTTAGTTGCACTAGCTAACTCTAATGTTTTGGAAGTTGCAGAGATGGCAACATGTGCTATGGCTAATCTTATTTTGGACAGTGAAATTGCAGAGAAAGCTGTTGCAGAAGAAGTTATCTTGCCTGCTACCAGAGTATTACGTGAAGGCACAATCTATGGAAAAGCCCATGCTGCTGCAGCAATTGCTCGCCTCTTACATTCTCGGAAAGTAGATCATGTTGTAACTGATTGTGTGACTCGTGCTGGCACTGTTCTTGCATTAGTTTCGTTCTTGGATTCTGCTATTAATGGATCTGTTTCCCCATCAGAGGCTCTAGAAGCACTTGCCATTCTGTCCAGATCAGAGGAGTCCAGCACACATTTTAAACCTGCATGTGCAGTTTTGGCCGAATTCCCCCAAAACATAAGCCCAATAGTCCTATCTATTGCTGATTCAGCACCAATGTTGCAGGATAAAGCTATTGAGATATTGTCTCGATTATGCAAGGATCAACCTTTTGTTTTAGGAGACAATGCTGTTACTGCCTCTGGATGTATATCTTCAATGGCTAAGAGGATAATTAGTTCCACAAATGTGAAGGTCAAAATTGGGGGAGCTGCACTTCTTATTTGCGCTGCAAAAGCAAATCATCACAGACTTGTGGAGGATCTCAATTTATCAAACTTGTGTGCTAATCTTATTCGATCATTAGTTGATATGCTTAATTCTGCGGAGCCTTCTTTGGGTAACCGGGGTGATGACAATAAGGAATTCATAAGCATATGCAGGCATACAAAAGAAGAGGCCAGTGGTGGTGAATCAAACACTGGCACCAGCATTATATGTGGTGCTGATTTAGCAATATGGTTACTGTCTCTTCTTGCTTGTCATGATGAAAGAAATAGAACTATCATAATGGAGGCTGGAGCAATTGATGTTCTCACTGACAGGATCTCAAATTGTTTCTCACAATATTCTCAGGATGACTTCAAAGAAGATAGCGGCAGGTGGATTTGTGCTTTGTTGTTAGCAATATTATTTCAAGATAGAGATATCATACGGTCACATGCAACCATAAAACCTGTATCAGCACTTGCCAATTTATTGAAGTCAGAGGAATCAGCTAACAAATATTTTGCTGCACAGTCAATAGCTAGCCTTGTCTGTAATGGTAGCAGGGGAACACTTCTGTCTGTGGCAAATTCTGGGGCTGCTGGTGGACTCATCTCCTTGCTTGGCTGTGCTGATACAGATATCCAGGATCTTCTGGAATTGTCAGAGGAATTTTCATTGGTGCGTTATCCTGATCAAGTTGCTCTTCAGAGGTTGTTTAGAGTAGATGATATTAGAGTTGGTGCCACATCACGGAAGGCAATACCTGCCCTTGTTGATCTGCTCAAACCAATTCCAGATCGCCCACGAGCTCCATTTTTAGCACTTGGGCTTTTGATTCAGCTTGGTAGAGATTGTCCATCAAATAAGACTGTAATGGTAGAGTCTGGCACCCTAGAAGCACTTACAAAGTATCTTTCATTGAGTCCACAAGATGCTACTGAAGAAGCTGCAACAGATCTGCTAGGAATCCTGTTTAGCAGTGCTGACATACGAAAACATGATTCAGCATTTGGTGCTGTTAGTCAACTTGTAGCTGTCCTACGATTAGGAGGAAGAGGTGCAAGGTACAGTGCTTCAAAAGCCTTGGAAAGTTTGTTCTCTGCTGACCACATTAGAAACGCAGAGATTGCTCGACAAGCTGTTCAACCCTTGGTGGAGATTCTTAGTACTGGTTCAGAGAAGGAGCAGCATGCTGCAATTGCTGCATTGGTTAGGTTACTGAGTGAAAACCCATCAAAAGCACTCGCTGTTGCAGATGTTGAAATGAATGCAGTGGATGTTCTTTGCAGGATCCTTTCTGCGGATTGTTCAATTGAGCTCAAAGGGGATGCTGCTGAATTATGCTGTGCACTTTTTGGAAATACAAGGATTCGGTCCACTATGGCTGCTGCACGCTGCGTTGAACCTCTAGTCTCTCTCCTTGTAACTGAGTTTAGTCCAGCTCAGCACTCAGTTGTGCGGGCATTGGATAAGCTTGTTGATGATGAGCAACTGGCTGAATTAGTTGCTGCACATGGTGCAGTTGTTCCTCTTGTTGGCCTACTGTGTGGTAGGAACTATGTACTTCACGAGGCCATTTCCAGTGCTCTGGTCAAGTTAGGAAAAGACAGGCCTGGTTGTAAAATGGAAATGGTGAAAGCTGGAGTTGTTGATAGCATACTTGGCATCTTACCTGAATCACCTGATTATCTATGTGCAGCTTTTGCAGAATTGTTGCGAATATTGACCAATAATGCTACCATAGCTAAAGGACCATCAGCTGCTAAAGTGGTAGAGCCCTTGTTTTTGTTGCTGACAAGACAAGAATTTGGGCCTGATGGACAGCATAGCACATTGCAGGTTTTGGTCAATATCTTAGAACATCCACAGTGTCGTGCTGACCATAGACTGACTTCTCACCAAGTTATTGAACCGCTTATCCCCTTGCTTGATTCTGCAATACCAGCAGTGCAACAGTTGGTTGCTGAACTTCTTTCACATCTACTCCTAGAAGAACACCTTCAGAAAGATCCAGTGACACAGCAAGTAATTGGTCCTCTTATACGAGTTCTTGGTTCTGGCATACACATATTGCAGCAGAGAGCTGTGAAGGCCCTAGTTAGTATTGCTCTAACATGGCCAAATGAAATTGCTAAAGAGGGTGGTGTTGTTGAAATTTCTAAAGTGATATTGCAAGCCGATCCTTCTATTCCGCATGCCTTATGGGAGTCTGCTGCTTCTGTATTGTCATGTATTCTGCAATTTAGTTCTGAATTCTACTTGGAAGTGCCTATTGCTGTGTTGGTACGGTTGCTTCGGTCTGGTTCAGAGAGCACAGTTGTTGGTGCATTAAATGCGCTTCTGGTTTTGGAAAGTGATGATGGAACTAGTGCAGTAGCTATGGCTGAAAGTGGTGCCATAGAGGCACTCTTGGAGCTCCTAAGGTCTCATCAGTGCGAGGAGACTGCTGCTAGACTCTTGGAAGTATTGCTGAACAATGTAAAGATCCGAGAAACAAAAGCTACTAAATCAGCTATTGTACCATTATCCCAGTACCTCTTGGATCCTCAAACTCAAGCACAACAGGCAAGGTTATTGGCAACTTTGGCACTTGGCGATCTGTTCCAGAATGAAGGTCTTGCTCAAACAGCTGATGCAGTTTCAGCTTGTCGCGCTTTAGTGAATGTGCTTGAAGAACAACCGACAGAAGAAATGAAAGTCGTGGCCATTTGTGCTTTGCAAAACCTTGTGATGTACAGTCGATCAAATAGAAGAGCAGTTGCAGAGGCCGGCGGCGTTCAGGTTGTATTGGACCTCATAGGTTCAAGTGATCCAGAAACATCTATTCAGGCTGCAATGTTCATTAAACTTCTCTTCTCAAATAATACTATTCAAGAGTATGCTTCCAGCGAAACAGTCAGAGCAATAACTGCTGCTATTGAAAAAGATTTATGGGCTTCTGGAACCGTGAATGAGGAGTACCTGAAAGCCTTAAATTCTCTGTTTAGCAACTTCCCACGGCTGAGAGCAACTGAACCAGCAACACTTTGCATCCCCCATCTGGTTACATCCTTAAAGACAGGCTCAGAGGCTTGTCAGGAAGCTGCTTTGGATGCACTTTTCCTGCTCAGACAAGCTTGGTCAGCATGCCCAGCTGAAGTTTCAAAAGCTCAGTCAATTGCAGCAGCAGATGCTATTCCGTTTCTGCAGTATTTGATCCAGTCTGGCCCGCCTCGGTTTCAGGAGAAGGCAGAATTCCTACTGCAGTGTTTGCCGGGCACGTTGGTGGTGATCATCAAGCGTGGTAACAATATGAAGCAGTCTGTTGGAAACCCAAGTGTTTACTGTAAACTTACACTTGGCAACACTCCACCAAGGCAAACTAAGAGTAAATTTGGTAAAGTAACTATCCAAATTGATCGAGTGGTAATGCTTGGAGCAGTGGCTGGAGAGTACACTCTATTGCCTGAAAGTAAAAGTGGCCCCTCAAGGAATCTAGAAATAGAATTTCAGTGGTCTAACAAGTGA 6216 0.4356 MKMGLRDRTSSMEDPDGTLASVAQCIEQLRQRSSSVQEKEYSLRQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSTEGQIAAAKTVYAVSQGGVKDHVGSKIFSTEGVVPVLWEQLRRGLKTGDVVEGLLTGALKNLSSTTEGFWNTTIQAGGVDILVKLLATGQSSTLANVCFLLASVMMEDASACSKVLTADVTKQLLKLLGPGNDDAVRAEAAGALKSLSAQCKEARREIANSNGIPALINATIAPSKEFMQGECAQALQENAMCALANISGGLSYVISSLGQSLESCTTTTQTADTLGALASALMIYDNKAESTRSSDPSVVEQTLLKQFKPRLPFLVQERTIEALASLYGNPILSLKLANSDAKHLLVGLITMASNEVQDELIKALLTLCNGEGSLWRAIQGREGVQLLISLLGLSSEQQQECAVALLCLLTNENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDQPESKVYILDALRSMLSVAPLSDILREGSASSDAFDTMIMLLSSTNEETQAKSASALAGIFESRKDVRESSIAVKALWSAMKLVNVESESILMESSHCLASIFLSIKENRDVAAIARDTLSPLVALANSNVLEVAEMATCAMANLILDSEIAEKAVAEEVILPATRVLREGTIYGKAHAAAAIARLLHSRKVDHVVTDCVTRAGTVLALVSFLDSAINGSVSPSEALEALAILSRSEESSTHFKPACAVLAEFPQNISPIVLSIADSAPMLQDKAIEILSRLCKDQPFVLGDNAVTASGCISSMAKRIISSTNVKVKIGGAALLICAAKANHHRLVEDLNLSNLCANLIRSLVDMLNSAEPSLGNRGDDNKEFISICRHTKEEASGGESNTGTSIICGADLAIWLLSLLACHDERNRTIIMEAGAIDVLTDRISNCFSQYSQDDFKEDSGRWICALLLAILFQDRDIIRSHATIKPVSALANLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVRYPDQVALQRLFRVDDIRVGATSRKAIPALVDLLKPIPDRPRAPFLALGLLIQLGRDCPSNKTVMVESGTLEALTKYLSLSPQDATEEAATDLLGILFSSADIRKHDSAFGAVSQLVAVLRLGGRGARYSASKALESLFSADHIRNAEIARQAVQPLVEILSTGSEKEQHAAIAALVRLLSENPSKALAVADVEMNAVDVLCRILSADCSIELKGDAAELCCALFGNTRIRSTMAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVVPLVGLLCGRNYVLHEAISSALVKLGKDRPGCKMEMVKAGVVDSILGILPESPDYLCAAFAELLRILTNNATIAKGPSAAKVVEPLFLLLTRQEFGPDGQHSTLQVLVNILEHPQCRADHRLTSHQVIEPLIPLLDSAIPAVQQLVAELLSHLLLEEHLQKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVVEISKVILQADPSIPHALWESAASVLSCILQFSSEFYLEVPIAVLVRLLRSGSESTVVGALNALLVLESDDGTSAVAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKATKSAIVPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLAQTADAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNRRAVAEAGGVQVVLDLIGSSDPETSIQAAMFIKLLFSNNTIQEYASSETVRAITAAIEKDLWASGTVNEEYLKALNSLFSNFPRLRATEPATLCIPHLVTSLKTGSEACQEAALDALFLLRQAWSACPAEVSKAQSIAAADAIPFLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTKSKFGKVTIQIDRVVMLGAVAGEYTLLPESKSGPSRNLEIEFQWSNK* 2072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2436 2071 Gene3D - 385 572 IPR011989 -
Dod04g2436 2071 SUPERFAMILY ARM repeat 1635 1987 IPR016024 -
Dod04g2436 2071 Gene3D - 573 754 IPR011989 -
Dod04g2436 2071 Gene3D - 1660 1761 IPR011989 -
Dod04g2436 2071 Gene3D - 1762 1988 IPR011989 -
Dod04g2436 2071 Gene3D - 1136 1324 IPR011989 -
Dod04g2436 2071 Gene3D - 1325 1653 IPR011989 -
Dod04g2436 2071 Gene3D - 8 374 IPR011989 -
Dod04g2436 2071 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 2025 2071 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Dod04g2436 2071 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 2025 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Dod04g2436 2071 SUPERFAMILY ARM repeat 16 601 IPR016024 -
Dod04g2436 2071 SUPERFAMILY ARM repeat 573 944 IPR016024 -
Dod04g2436 2071 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 1 2025 - -
Dod04g2436 2071 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 2025 2071 - -
Dod04g2436 2071 Gene3D - 759 1130 IPR011989 -
Dod04g2436 2071 SUPERFAMILY ARM repeat 832 1118 IPR016024 -
Dod04g2436 2071 SMART arm_5 1271 1311 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 1188 1229 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 1816 1856 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 692 730 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 1398 1438 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 53 94 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 227 268 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 1773 1814 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 95 135 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 1525 1566 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 270 319 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 484 524 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 1357 1397 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 526 566 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 1689 1728 IPR000225 GO:0005515
Dod04g2436 2071 SMART arm_5 1440 1480 IPR000225 GO:0005515
Dod04g2436 2071 Pfam Armadillo/beta-catenin-like repeat 63 93 IPR000225 GO:0005515
Dod04g2436 2071 Pfam Armadillo/beta-catenin-like repeat 484 523 IPR000225 GO:0005515
Dod04g2436 2071 Coils Coil 256 283 - -
Dod04g2436 2071 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 495 537 IPR000225 GO:0005515
Dod04g2436 2071 SUPERFAMILY ARM repeat 1137 1526 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2436 Dod-Chr4 48151193 48164793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2436 416 593 U-box Gene Family AT3G46510 29.891 8.74e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2436 - - gmx:100794002 3516.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2436 04 48151193 48164793 Dod04g2436 04 48151193 48164793 ECH
Dod04g2436 04 48151193 48164793 Dod04g0447 04 6170018 6180327 PCT