Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2427 ATGGAGAAGCTTCCACTTCTGCTGGTGCAAGTCACAAGATTCACTTGCGGTGCCCTTTGTGTTGGGTTTGCTCTTTCTAATGTCATTGCTGATGGACCTACTGGAACTTTGTTCGTTAACACTTGGGCTAAGCTAGCCCGAGGAAGCACACTTGAAGAAGATGAGAAGCCATTTCTGAATAGAACAACGGTTCTAGGATCATCATCTCAGGCAAGCTTCATGGCATCGTCACAACGATTTGACCATCGTGAATTCAAGCCACTGCCACTCGTGCTTGGTAGCTCTGACAACACAGCGGAACGCAAGAAGGAGACAGATCTTGCAATGTTGAAACTCACAAAGGAGATGGTGGAGAAGCTGAAGAAGAAAGCCAATGATGAGTTGATGATGGAATATGATGAGACGACAATGGAGCAACAACGTCGACCTTATAGCAGATATGAAAGCATTGCTGCTCATATTTGGAGGTGTGCATGCAAGGCACGCAAAAGTGATGATAATCAACCAACGGTGATTCACATTGTTGCTGGCACTCGGAATAGAGTGAAGCCACCTCTCCCTCTAAACTATTTTGGGAACGCCACACATCCAACTGTGACACCCACGTGCCTCAGTGGTGACATTGTGTCAAAGCCCTTGAGCTATGGGGCGCATAAGATAAGGGAAGCGGTTGGAGTTCTAACAGATGAGTACTTGAAATCCGCTTTTGATTTTATTAGCAGGCAGGACGATGTGAGAAGGCTTAGGCCATCCTTCAACAGTGAAGGCTGCGTAGAAGCACCATATCTTGGGAATCCAAACCTCAACATTTGGAGCTGGATGAGTAATATGCCAATCTATGGGCCAGATTTTAGGTGGGGAAGGCCAGTTTATATGGGTCCAGGTGTTGGGGGTGGAGATGGCAGGGCATTCATCATGCCAAGTGCAGCAGAGGATGGATCTCTTTCCATTGCCATTCGTTTGCAGACTGCTTATTTGGAAGCATTCAAGAAGTTCTTCCATGATGACATATGA 1014 0.4655 MEKLPLLLVQVTRFTCGALCVGFALSNVIADGPTGTLFVNTWAKLARGSTLEEDEKPFLNRTTVLGSSSQASFMASSQRFDHREFKPLPLVLGSSDNTAERKKETDLAMLKLTKEMVEKLKKKANDELMMEYDETTMEQQRRPYSRYESIAAHIWRCACKARKSDDNQPTVIHIVAGTRNRVKPPLPLNYFGNATHPTVTPTCLSGDIVSKPLSYGAHKIREAVGVLTDEYLKSAFDFISRQDDVRRLRPSFNSEGCVEAPYLGNPNLNIWSWMSNMPIYGPDFRWGRPVYMGPGVGGGDGRAFIMPSAAEDGSLSIAIRLQTAYLEAFKKFFHDDI* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2427 337 Pfam Transferase family 3 333 - -
Dod04g2427 337 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 337 - -
Dod04g2427 337 Gene3D - 93 335 IPR023213 -
Dod04g2427 337 Gene3D - 1 85 IPR023213 -
Dod04g2427 337 Coils Coil 107 127 - -
Dod04g2427 337 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2427 Dod-Chr4 48089427 48090440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2427 1 335 Monolignol Biosynthesis Gene Families AT5G48930 35.821 3.29e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2427 K13065 - gmx:100779652 414.075