Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2410 ATGACGCAGCAGAATGTGGTAGTGTCGGAGACCAAATCTGGGATCAACAGGGCTATGACCGGTAGTGCACAGAAGCCACCGGCGGGGCCTGGAGGAGGGTACTTTCCCATTCCAAGGAGGAAGGTTCTCGAGAGCCTTGAAATCAATGGTGGCCAAAGAATCAATGCATGGGTTGACTCCATGAGAGCATCTTCTCCCACCCATGTCAAGGCCACTCCTTCTTCTTTGGCCGATGAACACAGCTCTTGGATTCTTCACCACCCATCAGCATTAGACATGTTCGAGCAAATCATGGATGCATCCAAGGGAAAGCAACTCGTCATGTTTCTGGACTATGATGGTACCTTGTCGCCCATAGTCGAGGACCCCGACTGTGCTTTCATGCCGGATTCGATGAGAAAAACAGTGAGGAGACTTGCAAGGTGTTTTCCTACTGCTATAGTTAGCGGCAGATGCAGAGACAAGGTGTACAATTTTGTGCGCTTAGCAGAGCTATATTATGCTGGAAGCCATGGTATGGATATTAAAGGGCCAACAAAAAGCTCCAAATATAACAAAGATACTAAAGCAGAGGCAGTTCTTTTTCAACCTGCCACTGAATTTCTTCCCATGATAGACGAGGTGTACCAAGAATTGGTTGAGAAAACTAAATCAACACCTGGAGCCAGGGTGGAAAACAACAAGTTTTGTGTCTCTGTTCATTTCCGTTGTGTTGAGGAAAAGAAATGGAGTGAACTGGCACAAGAAGTTAGATCAGTGCTAAAGAAGTACCCGAAGCTTCGTCTTAGCCAAGGGAGAAAGGTATTGGAGATTCGTCCCACTATTAAATGGGACAAAGGGAAGGCCCTGGAATTTTTGCTAGAGTCTCTCGGATTTGCCAACAGTAGTGATGTCTTTCCTGTATATATTGGTGATGATAGAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGAATTCTGGTCTCGAAATTTCCGAAAGACACTAGTGCATCATACTCTTTACAAGAACCCAATGAGGCAAGTGTAATTTCCCTACGTAATTTATCCTTTGTTGCTCTATCGAATCGTACGCCTAGAATTTATGTGTTTATTTATTTATCTCATGCAGGTGATGGACTTCCTTCAACGCTTAGTGGAGTGGAAGCAACAAACCCTGAGAGCACGTTCCCGGGTGTAAATGAATAG 1203 0.448 MTQQNVVVSETKSGINRAMTGSAQKPPAGPGGGYFPIPRRKVLESLEINGGQRINAWVDSMRASSPTHVKATPSSLADEHSSWILHHPSALDMFEQIMDASKGKQLVMFLDYDGTLSPIVEDPDCAFMPDSMRKTVRRLARCFPTAIVSGRCRDKVYNFVRLAELYYAGSHGMDIKGPTKSSKYNKDTKAEAVLFQPATEFLPMIDEVYQELVEKTKSTPGARVENNKFCVSVHFRCVEEKKWSELAQEVRSVLKKYPKLRLSQGRKVLEIRPTIKWDKGKALEFLLESLGFANSSDVFPVYIGDDRTDEDAFKKLRDRGQGFGILVSKFPKDTSASYSLQEPNEASVISLRNLSFVALSNRTPRIYVFIYLSHAGDGLPSTLSGVEATNPESTFPGVNE* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2410 400 SUPERFAMILY HAD-like 107 354 IPR036412 -
Dod04g2410 400 TIGRFAM T6PP: trehalose-phosphatase 104 345 IPR003337 GO:0003824|GO:0005992
Dod04g2410 400 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 360 IPR044651 GO:0004805|GO:0005992
Dod04g2410 400 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 360 - -
Dod04g2410 400 MobiDBLite consensus disorder prediction 1 20 - -
Dod04g2410 400 Pfam Trehalose-phosphatase 109 343 IPR003337 GO:0003824|GO:0005992
Dod04g2410 400 MobiDBLite consensus disorder prediction 1 31 - -
Dod04g2410 400 CDD HAD_TPP 107 343 - -
Dod04g2410 400 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 108 319 IPR006379 -
Dod04g2410 400 Gene3D - 108 340 IPR023214 -
Dod04g2410 400 Gene3D - 188 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2410 Dod-Chr4 47938020 47941122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2410 102 316 Trehalose Biosynthesis Gene Families AT1G70290 26.667 1.11e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2410 K01087 - gmx:100794430 602.823