Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2373 ATGGAGGAGGAAGAGCACGAGGTGTACGGAGGAGAGATCCCAGACGTTGGAGAGATGGAGGGTGACGTTGACATGTCCGCCGCCGACGACGACCCCGCCGTCAAGGAGCTCGACGAGATGAAGCGCCGCCTCAAGGAGATGGAAGAGGAGGCCGCCGCTCTCCGCGAGATGCAAGCCAAGGTCGAAAAGGAGATTGGCTCCGTTCAAGATCCTGCTAGTGCAGCTGCTTCTCAGGCAGGCAAGGAGGAGGCAGATTCTCGATCTGTTTTTGTTGGCAATGTTGATTATGCATGCACACCAGAGGAAGTGCAGCAACACTTTCAATCATGTGGCACAGTGAACAGGGTCACTATCCTGACTGACAAATTTGGCCACCCTAAAGGTTTTGCTTATGTGGAGTTCGTTGAAACTGAAGCTGTTCAAGAGGCTCTCCTCTTGAATGAATCAGAATTGCATGGCCGTCAATTGAAGGTCTTGCCAAAGAGGACCAATGTTCCTGGAATGAAACAGTATCGTCCTAGGCGGTTTAATCCTTACATGTCATATGGCTTTAGGAGGCCATATGCTCCTCCTTCTTACTTTTATTCCCCGTATGGATATGGGAAGGCTCCTAGGTTTAGAAGGGCAACTCGTTACATGCCCTACTACTAG 651 0.5084 MEEEEHEVYGGEIPDVGEMEGDVDMSAADDDPAVKELDEMKRRLKEMEEEAAALREMQAKVEKEIGSVQDPASAAASQAGKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVETEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMSYGFRRPYAPPSYFYSPYGYGKAPRFRRATRYMPYY* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2373 216 PANTHER POLYADENYLATE-BINDING PROTEIN 3 1 214 - -
Dod04g2373 216 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 87 163 IPR000504 GO:0003723
Dod04g2373 216 Gene3D - 27 159 IPR012677 -
Dod04g2373 216 SMART rrm1_1 88 159 IPR000504 GO:0003723
Dod04g2373 216 MobiDBLite consensus disorder prediction 62 84 - -
Dod04g2373 216 SUPERFAMILY RNA-binding domain, RBD 78 185 IPR035979 GO:0003676
Dod04g2373 216 CDD RRM_II_PABPs 88 159 - -
Dod04g2373 216 MobiDBLite consensus disorder prediction 1 33 - -
Dod04g2373 216 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 1 214 - -
Dod04g2373 216 Coils Coil 30 64 - -
Dod04g2373 216 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 157 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2373 Dod-Chr4 47577682 47582988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2373 84 158 Eukaryotic Initiation Factors Gene Family AT2G36660 34.211 5.49e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2373 K14396 - gmx:100789721 364.77