Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2370 ATGGAACGGTATGAGATAATCAGAGATATTGGTTCAGGTAACTTCGGTGTAGCGAAGCTCGTTAGAGAGAAACGGAGTGGTGAGTTCTATGCTGTCAAGTTCATCGAGAGAGGCCTCAAGATTGACGAGCACGTGCAAAGGGAGATCATAAACCATAGGTCCTTGAAGCACCCCAATATCATTAGATTTAAAGAGGTGCTACTTACTCCAACTCATCTAGCCATTGTGATGGAATATGCTGCAGGGGGAGAACTATTTGAAAGAATATGTAGTGCGGGTAGATTCAGTGAGGACGAGGCGAGATATTTTTTCCAGCAATTGATTTCTGGAGTCAGCTACTGCCATTCAATGGAAATTTGTCATAGAGATCTAAAGCTGGAAAACACACTTCTAGATGGAAGCTCAGCACCACGACTAAAAATATGCGACTTTGGTTACTCAAAGTCATCTGTTCTGCACTCCCAGCCAAAATCTACTGTTGGAACCCCTGCCTATATTGCTCCGGAGGTCTTGTCAAGAAGAGAATATGATGGGAAGGTTGCAGATGTTTGGTCTTGTGGGGTGACCTTATACGTGATGCTAGTTGGCGCTTATCCTTTTGAAGACCCAGAAGACCCAAGAAACTTCAGAAAAACACTTCAGCGAATTCTTAGTGTCCACTATGCTATTCCAGACTATGTTCGTATCTCTAAAGAGTGTAGACACCTTCTATCTAGAATATTTGTTCCCAACCCGGAGAAGAGAATTACCATACCGGAGATTAAAATGCACCTGTGGTTCCTACAGAATTTGCCACTAGAATTTATGGCCGAGGGTGAAGGTGGGTTGCAAGATGATGTGAATGATTCAGCTGATCAGACTCAGAGCATTGAAGAAATACTGTCCATAATTCAAGAGGCTAGGAAGCCATGTGAGGAGGGCTCAAAAGTTGGTGGGCAGTTTGCTGGGGCCAGCATGGACCTTGATGATATGGATGCAGATGCTGACATCGATGATATTGAGACAAGCGGTGATTTTGTCTGTGCATTGTGA 1032 0.439 MERYEIIRDIGSGNFGVAKLVREKRSGEFYAVKFIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYAIPDYVRISKECRHLLSRIFVPNPEKRITIPEIKMHLWFLQNLPLEFMAEGEGGLQDDVNDSADQTQSIEEILSIIQEARKPCEEGSKVGGQFAGASMDLDDMDADADIDDIETSGDFVCAL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2370 343 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 337 - -
Dod04g2370 343 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2370 343 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Dod04g2370 343 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Dod04g2370 343 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2370 343 SUPERFAMILY Protein kinase-like (PK-like) 2 266 IPR011009 -
Dod04g2370 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Dod04g2370 343 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Dod04g2370 343 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2370 343 PANTHER SERINE/THREONINE KINASE 2 337 - -
Dod04g2370 343 CDD STKc_SnRK2 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2370 Dod-Chr4 47555565 47558936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2370 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 44.238 3.82e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Dod04g2370 Pkinase 2.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2370 K14498 - gmx:100807981 607.446