Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2366 ATGAAGAGACTCGGCAGCTCCGATTCTTTGGGTGCTCTCATGACTATTTGTCCGTCAACAGAGGAACACAGCCCGAGGAACAACCACGTGTACGGAAGGGAGTTCCAATCCATGTTGGAGGGACTCGACGAAGAAGGGTGTGTCGAAGAATCGGGACATCACGGCGAGAAGAAGCGTCGTTTAAGCGTCGATCAAGTGAAGGCCTTGGAGAAGAACTTCGAAGTAGAGAACAAGCTCGAACCAGACAGGAAGGTTAAGCTTGCACAAGAACTTGGGTTGCAGCCAAGACAAGTAGCCGTTTGGTTCCAAAACCGTCGAGCTAGATGGAAAACCAAGCAATTGGAGAGAGATTATGGCGTTCTCAAATCCAATTATGAAGCGCTTAAACTTAACTTCGAAACCCTCCAACAGGACAACGAAGCCTTACTCAAAGAGATTAAGGAATTGAAGTCGAGGCTGCAAGAGGAACAACAACACACTGAAAGCGATGCTTCGGTGAAGAAGGAAGAGATGGTAACCTCCCTGCAAGACTCGGAGGAGGACAAAACGATGGACAAGTGTAATAAGCCTTCTTCTCTTGAAACCGTCATTCCTGGATCGGATTCCAAGGAATTGAACTATGAGTGCTGCTTCAACAGCGGTGGTGATGGGGTTGGAGGAGCGGCATCGCTCTTCGCCATGGACTTCAAAGACGGTTCTTCTGATAGCGACTCAAGCGCAATCTTGAACGAAGAGAACAACAACAGCAGCAGCCCCATTAACAACGCTGCGATTTCATCATCTGGGGTTCTGCAAAGTCCAAGTCTTTTGATGTCGTCGTCACCTGGGTCGTCTTCGCTCAAGTTCAATTGTTCCTCGTCGTCCTCGCCGTCTTCGATGAACTGCTTCCCGTTCCAGAAAGCGTACCAGGCAGCACCGTACGTGAAGATGGAAGAGCACAATTTCTTCAGTGCAGACGTCGAGGCCTGCAACTTCTTCTCTGATGAGCAAGCACCTACCTTGCAGTGGTACTGTTCAGAAGAGTGGAGCTAA 1032 0.4922 MKRLGSSDSLGALMTICPSTEEHSPRNNHVYGREFQSMLEGLDEEGCVEESGHHGEKKRRLSVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKSNYEALKLNFETLQQDNEALLKEIKELKSRLQEEQQHTESDASVKKEEMVTSLQDSEEDKTMDKCNKPSSLETVIPGSDSKELNYECCFNSGGDGVGGAASLFAMDFKDGSSDSDSSAILNEENNNSSSPINNAAISSSGVLQSPSLLMSSSPGSSSLKFNCSSSSSPSSMNCFPFQKAYQAAPYVKMEEHNFFSADVEACNFFSDEQAPTLQWYCSEEWS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2366 343 Pfam Homeobox associated leucine zipper 112 154 IPR003106 GO:0006355|GO:0043565
Dod04g2366 343 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 335 IPR045224 GO:0003700
Dod04g2366 343 SMART HOX_1 55 116 IPR001356 GO:0003677
Dod04g2366 343 Coils Coil 111 163 - -
Dod04g2366 343 MobiDBLite consensus disorder prediction 235 254 - -
Dod04g2366 343 MobiDBLite consensus disorder prediction 153 195 - -
Dod04g2366 343 MobiDBLite consensus disorder prediction 153 188 - -
Dod04g2366 343 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Dod04g2366 343 CDD homeodomain 57 113 IPR001356 GO:0003677
Dod04g2366 343 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE 1 335 - -
Dod04g2366 343 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
Dod04g2366 343 Pfam Homeodomain 57 110 IPR001356 GO:0003677
Dod04g2366 343 SUPERFAMILY Homeodomain-like 42 114 IPR009057 -
Dod04g2366 343 PRINTS Lambda-repressor HTH signature 92 108 IPR000047 GO:0003677
Dod04g2366 343 PRINTS Lambda-repressor HTH signature 83 92 IPR000047 GO:0003677
Dod04g2366 343 Gene3D - 51 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2366 Dod-Chr4 47463040 47465761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2366 1 343 Homeobox Transcription Factor Family AT4G40060 44.602 1.32e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod04g2366 Homeodomain 5.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2366 K09338 - gmx:100796213 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2366 04 47463040 47465761 Dod04g0500 04 7145527 7148788 PCT