Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2362 ATGCTTCCCTATTCCAGCAACATAAGCCAATCTCTTGTGCACAAGCCAAATAACCAGAAAGATAATAGATTCCCCTGTCGGGTCTTCAAGTTATTGCGGAGGCTCTTCCGTGGAAAGGAAGCTGATGGGGGGTCGCGAAGTGAGGAAGAAGATAGAGTCTACTCTTGGCTATACGCCTTGGCCCAGTCTGAGAAATACTTGGTCTTCGAGCGTTCTGTTCTTCAATTATGTGCAGGCTTAAGTTTCACTGAAGCTGAGAGGAGGCTGAGGGAAAATGGCCCAAATGCTCCACTTGAATATTCATTTCCAAGCTGGTGGCATCTTCTATGGAACGCTCTTTTCCATCCTTTCAATATGATTCTGATTGTTTTATCTGCAATGTCATTCATTGCCCGTGACAATCCAAATGGATGTATCATGCTCACATTGGTTTTCATCAGTGTCTCCCTTCGTTTCTGTCAGGAATACAGCAGCTCAAAAGCAGCCATGAAGCTTTCAGAATTTGTGAGATGCCCTGTAAAAGTCCAAAGATGCGCTGGTAGAGTTGTGCAGACAGAGTTAATAGTTCAGGTTGATCACAGAGATGTAGTTCCCGGTGACATTGTGATATTCGAACCTGGGGACCTCTTTCCAGGAGATATCAGGCTGTTATCTTCAAAACATCTTGTTGTAAGCCAGGCCTCACTAACTGGGGAATCTTGGACAACTGAGAAAACTGCCGATGTCAGAGAAGATCGCAACACTCCTTTATTGGATTTAAAGAACATCTGCTTCATGGGCACAAATGTGGTCTCAGGTACTGGAACAGGCTTAGTTGTTTCAACTGGATCTAATACTTACATGAGCACCATGTTTTCAGAAGTTGGGAAGAAGAACCCACCAGATGACTTTGAAATGGGTCTCAAGTGGATATTTTACTTGCTTATTTCCGTTATGCTAGTCATAGTTACAATCATGTTTGTCACAGATTACATTACATCTCGTAATTTGAGCAACAGTCTTCTTTTTGGAATCTCAGTTGCATCTGCCCTCAATCCTCAGATGCTTCCCCTTATCATTAACACATGCCTTGCAAAAGGAGCACTTGCTATGGCTAAAGACAGATGTATAGTCAAAAGTTTAACAGCTATACGTGAGATGGGATCGATGGATATTCTTTGTATTGACAAGACAGGCACACTTACAATGAATCGTGCAATCATGGTTAGTCATGTTGACATCAGGGGGTTACTCCAAGAGAAAGTTCTGCGCTTTGCCTTTCTCAATTCTTACTTCAAGACTGATCAAAAGTATCCGCTGGATGATGCAATTCTAGCATATGTATATACAAATGGATTCAAGTTTCAGCCATCCAAGTGGAGGAAGGTAGATGAGATTCCTTTTGACTTCATAAGAAGGAAAGTATCTGTCATCTTAGAAACAGATGACAAACACTCGCCGTTCTTTGGCAGGTTTATGGTAACAAAAGGAGCATTGTTGGAAATCATGAGAGTTTGCTCTTTCATTGAGAATTCTGATAAAGATGAAATTTCCATCTTCTCTTCAGATGACTATCAGAGGATTTTAAATCTGTCAGAAGAACTGAGCAATGAGGGGTTAAGGGTTATAGGAGTAGCTATAAGGAAGCTGGGAATGGAAACAAGTAGTGGAAACAGGACAAGTGATGAGGATACTGAAAGAGACATGATATTCCTTGGCTTCATAACATTTTTTGATCCACCTAAGGACTCAGCAAAGCAAGCACTGTGGCGTTTGGCCGAGAAGGGAGTGAAAGCAAAGGTTTTGACAGGTGATTCTCTCTCCTTGGCAACAAGGGTATGCGCTGAAGTTGGCATAAGAACCACTCATGTCATAACCGGGCCTGAGCTAGAACAACTCGACCAAGACACTTTCCATGAGACTGTTAAAAGAGCCACGGTGCTAGCACGCCTCACCCCAACTCAGAAACTCAGAGTGGTGGAATCCTTGCAGACGATCGGAAACCATGTTGTTGGGTTCTTGGGAGATGGAGTAAATGATTCATTAGCTCTAGATGCCGCCAATGTAAGCATCTCAGTGGACTCAGGGGTAGCCATTGCCAAAGACATGGCAGATATTATCTTACTTGAGAAAGATCTCAATGTGCTTGTTGCAGGAGTGGAGCATGGTAGGCTCACCTTTGGCAACACAATGAAGTATGTGAAGATGTCAGTTATTGCAAACTTGGGAGGCGTCATCTCACTCCTCATAGCAATATTGTTCCTCAAGTATGAGCCATTGACTTCTAGACAACTTCTCACTCAGAATTTCCTTTACAGCGTGGGACAGATCGCCATACCTTGGGACAAGATGGATGAAGATTATGTGAAGAGTCCTCAGAAGTGGTCGAAGAAAGGCTTGCCAATGTTCATATTGTGGAATGGGCCAGTGTGCACTCTCTGTGATGTTGCAGCACTTGTTTTCCTTTGGTTCTACTACCAGGTTGATGGTGATGTGGATGAGAAGTTTTTCCATTCAGCTTGGTTCATTGAGGGTCTCCTCATGCAGACCCTTATCATTCATTTGATCAGGACTGAGAAAATTCCTTTCATACAGGATATTGCCTCTTGGCCTGTGATATGCTCCACCCTTGTGATATCTGCCATTGGAATTGCATTGCCATTCACACCTATTGGGAAGGTCATGCAATTCACACTTCTACCGCTCTCATATTTTGGATTTTTGCTTATTCTTTTTCTGGGATACTTTACAGTTGGACAGGTGGTTAAGAGAGTTTACATATTGGTTTATAAGAGATGGCTCTGA 2784 0.4282 MLPYSSNISQSLVHKPNNQKDNRFPCRVFKLLRRLFRGKEADGGSRSEEEDRVYSWLYALAQSEKYLVFERSVLQLCAGLSFTEAERRLRENGPNAPLEYSFPSWWHLLWNALFHPFNMILIVLSAMSFIARDNPNGCIMLTLVFISVSLRFCQEYSSSKAAMKLSEFVRCPVKVQRCAGRVVQTELIVQVDHRDVVPGDIVIFEPGDLFPGDIRLLSSKHLVVSQASLTGESWTTEKTADVREDRNTPLLDLKNICFMGTNVVSGTGTGLVVSTGSNTYMSTMFSEVGKKNPPDDFEMGLKWIFYLLISVMLVIVTIMFVTDYITSRNLSNSLLFGISVASALNPQMLPLIINTCLAKGALAMAKDRCIVKSLTAIREMGSMDILCIDKTGTLTMNRAIMVSHVDIRGLLQEKVLRFAFLNSYFKTDQKYPLDDAILAYVYTNGFKFQPSKWRKVDEIPFDFIRRKVSVILETDDKHSPFFGRFMVTKGALLEIMRVCSFIENSDKDEISIFSSDDYQRILNLSEELSNEGLRVIGVAIRKLGMETSSGNRTSDEDTERDMIFLGFITFFDPPKDSAKQALWRLAEKGVKAKVLTGDSLSLATRVCAEVGIRTTHVITGPELEQLDQDTFHETVKRATVLARLTPTQKLRVVESLQTIGNHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYVKMSVIANLGGVISLLIAILFLKYEPLTSRQLLTQNFLYSVGQIAIPWDKMDEDYVKSPQKWSKKGLPMFILWNGPVCTLCDVAALVFLWFYYQVDGDVDEKFFHSAWFIEGLLMQTLIIHLIRTEKIPFIQDIASWPVICSTLVISAIGIALPFTPIGKVMQFTLLPLSYFGFLLILFLGYFTVGQVVKRVYILVYKRWL* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2362 927 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 140 432 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod04g2362 927 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 632 747 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod04g2362 927 Gene3D - 171 275 - -
Dod04g2362 927 SUPERFAMILY HAD-like 559 715 IPR036412 -
Dod04g2362 927 SFLD p-type atpase 369 717 IPR044492 -
Dod04g2362 927 SUPERFAMILY Calcium ATPase, transmembrane domain M 77 924 IPR023298 -
Dod04g2362 927 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 74 926 IPR006415 GO:0015444|GO:0015693|GO:0016021
Dod04g2362 927 Gene3D - 399 571 IPR023299 GO:0000166
Dod04g2362 927 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 380 574 IPR023299 GO:0000166
Dod04g2362 927 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 38 926 - -
Dod04g2362 927 Pfam E1-E2 ATPase 181 366 - -
Dod04g2362 927 Pfam haloacid dehalogenase-like hydrolase 383 681 - -
Dod04g2362 927 SFLD C1.7: P-type atpase like 369 717 - -
Dod04g2362 927 SMART Cation_ATPase_N_a_2 67 133 IPR004014 -
Dod04g2362 927 ProSitePatterns E1-E2 ATPases phosphorylation site. 389 395 IPR018303 -
Dod04g2362 927 Pfam Cation transporter/ATPase, N-terminus 78 128 IPR004014 -
Dod04g2362 927 SUPERFAMILY Calcium ATPase, transduction domain A 181 286 IPR008250 -
Dod04g2362 927 Gene3D - 137 878 - -
Dod04g2362 927 Gene3D - 384 704 IPR023214 -
Dod04g2362 927 PANTHER CATION TRANSPORTING ATPASE 38 926 - -
Dod04g2362 927 PRINTS Magnesium-transporting ATPase signature 300 316 IPR006415 GO:0015444|GO:0015693|GO:0016021
Dod04g2362 927 PRINTS Magnesium-transporting ATPase signature 421 434 IPR006415 GO:0015444|GO:0015693|GO:0016021
Dod04g2362 927 PRINTS Magnesium-transporting ATPase signature 795 811 IPR006415 GO:0015444|GO:0015693|GO:0016021
Dod04g2362 927 PRINTS Magnesium-transporting ATPase signature 830 851 IPR006415 GO:0015444|GO:0015693|GO:0016021
Dod04g2362 927 PRINTS Magnesium-transporting ATPase signature 743 754 IPR006415 GO:0015444|GO:0015693|GO:0016021
Dod04g2362 927 PRINTS Magnesium-transporting ATPase signature 880 901 IPR006415 GO:0015444|GO:0015693|GO:0016021
Dod04g2362 927 PRINTS Magnesium-transporting ATPase signature 725 740 IPR006415 GO:0015444|GO:0015693|GO:0016021
Dod04g2362 927 PRINTS Magnesium-transporting ATPase signature 775 788 IPR006415 GO:0015444|GO:0015693|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2362 Dod-Chr4 47422909 47427333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2362 51 793 Primary Pumps ATPases(2) AT1G07810 24.476 8.45e-54 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2362 K01531 - gmx:100795153 1471.06