Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2352 ATGTCCAAGCCGTGGGGCAACATCGGAGACTGGGCGGCCGAGGCCGAGCGCGCCGAGGCCGAGGAGCGTGAGGCCGAGGCTGCCGCCGCCGCAGCCGGCTCCCAGAATTTCCCCAGCCTCAGGGAGGCCGTGACTGCCAAGCCCAAGAAGAAAAAGGCGATGACGCTCTCCGAGTTCACCAAGAGCAGCTACGCCTCCGGCGGCGGTGCCGCGTCGGAGTACCAGGGCCTGACGCCCGACGAGATGCTCCGCCTCCCGACGGGGCCGAAGGAGCGTTCCCCCGAGGAAATGCAGTACAACCGCCTCGGCGGCGGGTTCTCGAACTATGGTCGCTCCAGCGGGCCTCTGATGGGCCGCGGGAGGAACAGCGAGGGCAACGGCGAAAGTTCCTGGGGCGGCGGGAGAAGATCGTACGGCGGGTTCGACGAAGATCGCCGGGGTTCGAATTCTAGGGTTTCGGATTTCGATCAGCCATCGAGGGCTGACGAGGTGGATAATTGGGCGTCGGTGAAGAAACCGCTCCCGTCGCTCGATTCCGGAAGGCAAAATCGATACGGCTCGCTAGGCGGCGGTTCTGGTGGCGGTTTCGGTAGTAGCTCTAGGGCCGATGGGGTTGATCGTGATTTGGAGCATCGCGCTGTTGACAGGCCTGAGACAGAGGAGGAAAAAATATTAAAAGAAGAAATTGATAATTTGAAGAAGGAACTTGAGAAAGAGTCCACTATAAATTCAAATGACGAATCTGTGGATGCCACTGGTGCAGACCAAAGCAGTACACGGGCAATATTACTGCAGAAAGAAAGGGAGCTGGAAGAACTTATCCATGATTTGGATGACAAAGTTCGTTTTGGGCAGAAAGCTATTGAAAGGCCAGGTTCATCGGCAGGAAGGAGTGCTGGTTTTTCTGATGGGCCACCTTCTCGGACTGGATCATTTGAGGATTCTAGAGCTGAGTTTTCAGACAGACCTCGATCCCGTGGCATGGGAGATATGTGGGCGCGTCATAGTGATGACCGAAGATCATTTCAAGGTAGCAGGGATAGAGGAGATGACCGAATATCATTTCAAGGTACCAGGGACAGAGGAGGGTTTTTGAGTAGCAGAGACTTGAATAGGTGA 1119 0.5639 MSKPWGNIGDWAAEAERAEAEEREAEAAAAAAGSQNFPSLREAVTAKPKKKKAMTLSEFTKSSYASGGGAASEYQGLTPDEMLRLPTGPKERSPEEMQYNRLGGGFSNYGRSSGPLMGRGRNSEGNGESSWGGGRRSYGGFDEDRRGSNSRVSDFDQPSRADEVDNWASVKKPLPSLDSGRQNRYGSLGGGSGGGFGSSSRADGVDRDLEHRAVDRPETEEEKILKEEIDNLKKELEKESTINSNDESVDATGADQSSTRAILLQKERELEELIHDLDDKVRFGQKAIERPGSSAGRSAGFSDGPPSRTGSFEDSRAEFSDRPRSRGMGDMWARHSDDRRSFQGSRDRGDDRISFQGTRDRGGFLSSRDLNR* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2352 372 Coils Coil 219 242 - -
Dod04g2352 372 Pfam Plant specific eukaryotic initiation factor 4B 1 206 IPR010433 GO:0003743
Dod04g2352 372 Pfam Plant specific eukaryotic initiation factor 4B 205 349 IPR010433 GO:0003743
Dod04g2352 372 Coils Coil 8 35 - -
Dod04g2352 372 MobiDBLite consensus disorder prediction 314 357 - -
Dod04g2352 372 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 206 - -
Dod04g2352 372 MobiDBLite consensus disorder prediction 285 372 - -
Dod04g2352 372 MobiDBLite consensus disorder prediction 203 244 - -
Dod04g2352 372 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 205 349 IPR010433 GO:0003743
Dod04g2352 372 Coils Coil 260 280 - -
Dod04g2352 372 MobiDBLite consensus disorder prediction 245 260 - -
Dod04g2352 372 MobiDBLite consensus disorder prediction 1 260 - -
Dod04g2352 372 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 205 349 - -
Dod04g2352 372 MobiDBLite consensus disorder prediction 138 167 - -
Dod04g2352 372 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 206 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2352 Dod-Chr4 47334907 47339178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2352 205 349 Eukaryotic Initiation Factors Gene Family AT1G13020 51.701 1.84e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2352 - - mesc:110628624 237.269