Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2351 ATGGGAGTCTTCACATTCGTGCTCCGCAGCTCCGGCGGCGAGTGGACAGCAAAGCAACACTCCGGCGACATCGAGGCCTCCGCCCCCTCCACCTTCGAGCTCCAACGCAAGCTCGTCCATGCCGCCCTCGCCGCTGATTCCTCCGGTGCCGTTCAGTCCTCCTTCTCTTTCGTTTCTCCCTCCTCTGCTGTCTTCCAGGTGGTTGTGGGTGGTGCAATATTCGTTGGAGTTGGTGCTGTTGCTGCATCTGCTTCAGCGGGAGGTGCTGCCCCAGCTGAAGCTGCCCCTGCTGCTGAGAAGAAAGAAGAGAAGGTCGAGGAAGAGGAGGAGGACGATGATTTGGGATTGTCACTCTTTGATTAG 363 0.584 MGVFTFVLRSSGGEWTAKQHSGDIEASAPSTFELQRKLVHAALAADSSGAVQSSFSFVSPSSAVFQVVVGGAIFVGVGAVAASASAGGAAPAEAAPAAEKKEEKVEEEEEDDDLGLSLFD* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2351 120 Pfam 60s Acidic ribosomal protein 66 119 - -
Dod04g2351 120 MobiDBLite consensus disorder prediction 87 120 - -
Dod04g2351 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 IPR044252 GO:0003735|GO:0005840
Dod04g2351 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 - -
Dod04g2351 120 MobiDBLite consensus disorder prediction 104 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2351 Dod-Chr4 47330822 47332115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2351 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 75.000 1.25e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2351 K02942 - cpap:110811092 101.293