Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2348 ATGTGGAGTGAAGGACAAAGCTTTGAGGATGCGTTTCAGCTTGTGAAGAATGCCAGGGGAGTGACCAATCCTAACATGGGTTTTGCTTGTCAACTGCTGCAGTGTCAGAAAAGGGTACATGCTGTTCCTGCTAGTCCTAATTCTATTCTTAGGATGTATAGAATGGCTCCTCATTCCCCTTATGACCCTCTTCATTTGGTCCCCAAGATGGTGAACCAGCCATGTGCACGAGCACTTGATTCCCGTGGGGCTTTCATTGTTCATGTTCCTTCTGCTATTTATGTTTGGACAGGGAAGAATTGTAATTCCGTGATGTCTTGTAATGCACGATCAGCAGCTTTTCAGGTATTTCGATATGAGAAGGCGAACGGCCCTGTTCTTAGCATCCATGAGGATGAAGAGCCGCAAGAGTTTTGGATTGCTCTTTCCAATGAGCAACTGATATCAGGTGATTGTGATGAGGCTGAGGACAAGAAGGAAGTGGTGTTGAATCCTTCTGAAAGAGTGGAGATTGATGGTGCAGTTGATATGGGGGCTAGGCCTAGGAAAGTTGATGAGTATGATTTGGATTATGAGATCTTCCACAAGGCACGTGCTGGTGGGGTTGTTCCACCTTTTTCAGTGTCGAATGCTGGATCAGAAACTTGCCTTCCTGCTAGAGAAAACGGTTGGGGCAGACTGAGGCGGAAACTTGCTTGTGGTATCATGAAAGGATTTTTTACATCGTCCAAAAGGAACTGTGATACAACCTCATCCAATGATGAACCTTGTGTTATGGTGGAAGCAGTAAAACAACATTCTGCGGTTGAACCATCATCAAATTGTCCTTGCGGATCGCCAGATTCCTTTGAATGTTCTCCAATTATCAGCTCAGGCAGGGCAAAAGATGCTCTTGAAGTCTTGGATCACTTTGTTCCTAGTGTTGATTCATCACTGCCACTATCTCCTCCTGGAACATCAGATTCTCTTCCTTGTTTCCTGAGCAGCAGTCCGAGGTTAAGTTCCAAGTCACCAACACTTTCACCCTCAAGTTCTGATTACGCCAGTTCATTTACATTCTCACCTTCATCCACAAATTGGTCTTCTCAGCAGCCATCACCTTCTAGCCTTGAATCAACTGAACCCTTTTGTGTTAAAGATACTTCTTTCTCGGAAAGTTCCTGTTTAGTTCACAAAAAAGCTGCCTTCCCATCTGCCGAGGCATTTTTGGCTAATCAGACCTTGGGAGGGGCTAACTCCTATTTGCCATTGAAAGGGTCTTCCCCATCCATTGCAGAGCGCAGAGGGAGCAATCCACCACCTCGCATGTTGCTACCCTCGGTCAGTGAACCATCCAACATCCACAAGAACAAGATCCTTGTAAGATCACAGTCATTCTCTTTGCCGGAATTAGATGATAATTTGATGAAGGATGTTATTTGCAAACAATCTGATCATGGAAACAGTGCTGATATCAGTAATTAG 1464 0.4481 MWSEGQSFEDAFQLVKNARGVTNPNMGFACQLLQCQKRVHAVPASPNSILRMYRMAPHSPYDPLHLVPKMVNQPCARALDSRGAFIVHVPSAIYVWTGKNCNSVMSCNARSAAFQVFRYEKANGPVLSIHEDEEPQEFWIALSNEQLISGDCDEAEDKKEVVLNPSERVEIDGAVDMGARPRKVDEYDLDYEIFHKARAGGVVPPFSVSNAGSETCLPARENGWGRLRRKLACGIMKGFFTSSKRNCDTTSSNDEPCVMVEAVKQHSAVEPSSNCPCGSPDSFECSPIISSGRAKDALEVLDHFVPSVDSSLPLSPPGTSDSLPCFLSSSPRLSSKSPTLSPSSSDYASSFTFSPSSTNWSSQQPSPSSLESTEPFCVKDTSFSESSCLVHKKAAFPSAEAFLANQTLGGANSYLPLKGSSPSIAERRGSNPPPRMLLPSVSEPSNIHKNKILVRSQSFSLPELDDNLMKDVICKQSDHGNSADISN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2348 487 SUPERFAMILY Actin depolymerizing proteins 45 151 - -
Dod04g2348 487 Gene3D Severin 54 148 IPR029006 -
Dod04g2348 487 Gene3D Protein tyrosine phosphatase superfamily 1 53 IPR029021 -
Dod04g2348 487 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 1 67 IPR029021 -
Dod04g2348 487 PANTHER MKPA PROTEIN 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2348 Dod-Chr4 47313170 47314633 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2348 - - lja:Lj6g3v0574850.1 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2348 04 47313170 47314633 Dod04g0518 04 7402091 7404829 PCT