Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2324 ATGTTAGATAGTGGTGGTGGTGGCAGTGGTGCACGTGATTCTGAGTTGAGTTTGGAGACTGGGAATTCTACGCAGCGAAGCTCCATGAGCAGCGAAAGCAATTGCAGCACCAGTTTCAGCCGTCTCTCCTGCGACCTCCTCCCGGCATCGTCGCCGGAGAGTTTGTCACTGAAGCCTCACCGCTCCTCCGACTTCGCCTACTCCGCCATCGTCCGCCACAAGGCTGGCCTCACATTCCGCGACTTCCACCTCCTCCGCCGCATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCCGCCTCCGCAGCAGCAAGGACGAAGAAGAAGAAGAACATGAGGACAGGTGCTGCTTGTATGCTATGAAGGTGGTGGACAAAAACGCCGTCGCATTGAAGAAGAAGACGCAGAGAGCTGAAATGGAGAGAAAGATCCTCAAGATGCTCGACCACCCTTTCCTCCCTACGCTCTACGCCGAGTTCGAAGCCTCGTGTTTCTCTTGCATCGTCATGGAGTTTTGTTCCGGTGGGGACTTGCACTCCCTGCGCCACAAGTTCCCTAATAACCGTTTTCCCCTTGCCTCCGCAAGGTTTTATGCTGCTGAGGTGCTGGTAGCGTTGGAGTACCTTCATATGCTGGGAATCATCTACAGGGATCTCAAGCCCGAGAACGTGTTGGTCAGATCAGACGGTCACATCATGCTCTCCGATTTCGATCTTTCATTTTGCTCAGATGCAATCCCAGCCGTCGAATCCTCCGATTGCTTCCACGATCCCGCGTTTCCACCTGCATTGCCCTACGGACGCCTGCACACCACCACGTTCTCGTGCTTCCCGAACCGAGTCTTCCGGTCACGTAAAGTCCAAACCGTTCAACCGGACCGGCTCTTCGTGGCGGAACCGGTTTCGGCCCGGTCCTGCTCCTTCGTGGGTACACATGAGTACGTGTCGCCGGAAGTCGCCGCGGGAAGGTCCCACGGCAACGCCGTCGACTGGTGGTCGTACGGGATATTCATCTACGAGCTGATATACGGGCGTACGCCGTATGCGGCCGCATCGAACGAGGCTACGCTGCGCAACATCATAAAGAAGCCCCTGACGTTCCCCACGGCCACGCCCTCGAGCACCCTTGAGCTGCACGCGCGGGACCTCACATCCGGCTTGCTTCACAAGGATCCGGCTCAGCGTCTCGGGTCGAAGCGCGGCGCCGCTGACGTCAAGAAACACCCATTCTTCAAAGGGCTCAACCTAGCGCTGATTCGCATGTTGACACCGCCTCAAGTGCCCGGCTTGAGGAGGCCCAAAACGGCGTCGTTGAGCCACACACAGAGCAATTCCAACAGAAGCAACAGTAACGGTAACAGTAACAGTAACAAGCAACAATATACGGCGGCGTTTGACTATTACTTTTGA 1410 0.5681 MLDSGGGGSGARDSELSLETGNSTQRSSMSSESNCSTSFSRLSCDLLPASSPESLSLKPHRSSDFAYSAIVRHKAGLTFRDFHLLRRIGAGDIGTVYLCRLRSSKDEEEEEHEDRCCLYAMKVVDKNAVALKKKTQRAEMERKILKMLDHPFLPTLYAEFEASCFSCIVMEFCSGGDLHSLRHKFPNNRFPLASARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSFCSDAIPAVESSDCFHDPAFPPALPYGRLHTTTFSCFPNRVFRSRKVQTVQPDRLFVAEPVSARSCSFVGTHEYVSPEVAAGRSHGNAVDWWSYGIFIYELIYGRTPYAAASNEATLRNIIKKPLTFPTATPSSTLELHARDLTSGLLHKDPAQRLGSKRGAADVKKHPFFKGLNLALIRMLTPPQVPGLRRPKTASLSHTQSNSNRSNSNGNSNSNKQQYTAAFDYYF* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2324 469 Gene3D Phosphorylase Kinase; domain 1 430 441 - -
Dod04g2324 469 Gene3D Transferase(Phosphotransferase) domain 1 305 429 - -
Dod04g2324 469 Gene3D Transferase(Phosphotransferase) domain 1 173 240 - -
Dod04g2324 469 SMART serkin_6 82 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2324 469 MobiDBLite consensus disorder prediction 426 458 - -
Dod04g2324 469 Gene3D Phosphorylase Kinase; domain 1 80 172 - -
Dod04g2324 469 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 9 469 - -
Dod04g2324 469 MobiDBLite consensus disorder prediction 435 458 - -
Dod04g2324 469 PANTHER FLIPPASE KINASE 1-RELATED 9 469 - -
Dod04g2324 469 MobiDBLite consensus disorder prediction 15 34 - -
Dod04g2324 469 ProSiteProfiles Protein kinase domain profile. 82 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2324 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Dod04g2324 469 SUPERFAMILY Protein kinase-like (PK-like) 62 439 IPR011009 -
Dod04g2324 469 Pfam Protein kinase domain 82 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2324 469 Pfam Protein kinase domain 305 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2324 469 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2324 Dod-Chr4 47154931 47156706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2324 13 468 AGC Kinase Gene Family AT2G34650 64.363 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod04g2324 Pkinase 1.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2324 - - gmx:100795536 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2324 04 47154931 47156706 Dod04g2324 04 47154931 47156706 ECH