Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2303 ATGGTGGCACCATCATTAGCTACTCCACTTTGGCGCAATGGGCCAGAAGACAAGCCAGTGTTGTGCAACGCATGTGGATCAAGATACAGGCTATGTGGAAGCCTTGATGCCTATTTGCCCAAGCATTTCCACACAGGGCTCCTCAAGAACCTTGAAAATTTGAAGGATAATGGCAACCTCAATGTCAGGGACACACCTTCCACCCCGATTGTTCCAAATTCAGGAAGCACAACTCCAAGTTTTTGGGACACTAAGATCCCTTCAAGGAAACGTTCACGGGTGATATACCGCAGGATTACACCAATTGAGAAATTTCAGAATCAGCTTTACAATATGTGGAGGCTTCATGGGAATCCAGATGAACCAGAAGAGGTTTTGTTGGACCATAACGTGACCAACAACTTCATACCTAGAGATGAGATCGGCCTTGGAGCCATGCTGCTCAAACCAGATAATAATGATACTCCTTCATATAATGGAAGGGCTAATTATTGA 495 0.4485 MVAPSLATPLWRNGPEDKPVLCNACGSRYRLCGSLDAYLPKHFHTGLLKNLENLKDNGNLNVRDTPSTPIVPNSGSTTPSFWDTKIPSRKRSRVIYRRITPIEKFQNQLYNMWRLHGNPDEPEEVLLDHNVTNNFIPRDEIGLGAMLLKPDNNDTPSYNGRANY* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2303 164 PANTHER OSJNBB0038F03.10 PROTEIN 7 152 IPR044589 -
Dod04g2303 164 CDD ZnF_GATA 8 31 IPR000679 GO:0006355|GO:0043565
Dod04g2303 164 Pfam GATA zinc finger 7 33 IPR000679 GO:0006355|GO:0043565
Dod04g2303 164 Gene3D - 5 95 IPR013088 GO:0006355|GO:0008270
Dod04g2303 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 35 - -
Dod04g2303 164 PANTHER GATA ZINC FINGER PROTEIN 7 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2303 Dod-Chr4 46886496 46887291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2303 8 42 C2C2-Gata Transcription Factor Family AT4G17570 71.429 5.15e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dod04g2303 GATA 1.2e-09 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2303 - - ccaj:109803880 139.043