Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2287 ATGAAACCTATTATTGTGCTTCTCATGCTCTTTGCTGTGGCTCCAAGGCCAGGCTCAGCAGCTCCCTCTCCCACCATTTCCCCTACCAACAGTTCTATGTGCCCAGTGGAAATGAATTTTGTGCTGACAATTCCTTGGAAGTCCTCTAGCTGCCGTAACTTCCAACCCTTTGCATCCCGAAACGAAACACAGTCAAGTTTTTGTTGCAGAACTCTGTTAGCCCTCTTTGGCATAGCACTTGCTCAAAACCTGAGGTTAAACTCTCTTTTCCAACTCCCTAATCTTCCCACCTCCATCTCATGTCTTCAAGACTTCCAATCCAAACTAACTTCCCTCTCACTTCCCAATACCCTTGTGTCCTCTTGCTTTGACCCAATTCAGTTTGTTATCGGTCCCAACATCTGTGCTCACATCCAATCTAAGCAAGACTGGCTCAGCAAGGTTGGTCCTACAGCACAGTTTAACAATGCCTGTAAACCAGACCTCAGTGTTCCTGGCCGTTGTGATGCATGCGTGACTGAGGAGTTCAAGGTTCTGCAGGCGGTCACTGCCATTGATGGCAATGATTCACATTTCCTAGATTGCTTTCGCTTCACAATGTATTATGCTGCTGGAATTGCCAATGAGTTTGGCCCTCAAAGCAAAGGTGTTTTGTCATGCTTTTTTAAACAGCCGGTTAATGATCAAGCAGGGCATGTCAGAAGAAAGTGCCATCATGCTCTTGCAACTTGGTTAACTGGAGCTTCAGTTGCGTTCCTGGCCATCTTGTCTTCTTTGACTTGCTTGTATTATTGGTGCAGCAAGCGGGTGAGGAGAATAAATAATGAAAATTTGCATGTCCATGCTGATCCAGAGGAGCAAGGGTCTAGGCCAAGAGTGAGGCCAAATACAGGGTCAATTTGGTTCAAGTTTGAGGAACTAGTGATGGCCACCAATAACTTTTCACCCCAGAACTTCATTGGTAGAGGTGGTTTTGGGCTGGTTTACAAGGGCATTCTGCCTTGCAGCACAATGGTTGCAGTTAAAAAGATTGAAGAGTCAAATTCTCAAGGAGATGCTGAGTTCTACAGTGAGGTGGAGATCATTAGCAACTTGAAGCACCGCAATCTGGTGCCCTTAAGAGGGTGTTGTGTGGTTGATGAGGAGAAGGATCCTGAGTACAGAAGAAATCAAAGGTATCTTGTTTATGATTACATGCCGAATGGTAGCCTTGAAGACCATCTTTTCCCACCCTTGGACAACCAAAATGCAAAGAAATTGCTGACTTGGCCTCAAAGGAAAAGCATAATATTGGATGTGGCAAATGGGTTGGTTTATTTGCACTTTGGAATAAAACCTGCAATTTATCACAGAGATATCAAAGCCACCAATATACTGCTTGATGCAGGCATGAGGGCAAGGGTTGCAGATTTTGGGCTAGCCAAACAAAGCAGTGAAAGTAGCTCTCAGCTAATTACTAGAGTAGCCGGAACTCATGGATATCTAGCCCCAGAATATGCACTTTACGGTCAGCTAACTGAAAAGAGTGATGTTTTTAGCTTCGGTGTGGTTATTTTGGAGATAATGTGCGGAAGAAAAGCTCTTGACTTTTCTTCTTCAGGGACACCTGCTTTCTTTATCACTGATTGGGTATGGTCATTGATGAAGTCTGGAAACTTACGAGAAGCTTTGGATGCTTCTATCTTAATGGATGAAAATTCCACTAGAAACATAATAGAGAGATTCTTGCTGGTAGGAATCCTATCTTCTCATGTAATAGCTGCTTCTAGGCCAACAATTTTGGATGCTTTGAAGATGTTAGAAGGGGATATCGATGTTCCACCGATTCCAGATATGCCAGTGACTCTGGGGCACCATAACTATGTTGATTTCAGAGAAAAGTGA 1884 0.439 MKPIIVLLMLFAVAPRPGSAAPSPTISPTNSSMCPVEMNFVLTIPWKSSSCRNFQPFASRNETQSSFCCRTLLALFGIALAQNLRLNSLFQLPNLPTSISCLQDFQSKLTSLSLPNTLVSSCFDPIQFVIGPNICAHIQSKQDWLSKVGPTAQFNNACKPDLSVPGRCDACVTEEFKVLQAVTAIDGNDSHFLDCFRFTMYYAAGIANEFGPQSKGVLSCFFKQPVNDQAGHVRRKCHHALATWLTGASVAFLAILSSLTCLYYWCSKRVRRINNENLHVHADPEEQGSRPRVRPNTGSIWFKFEELVMATNNFSPQNFIGRGGFGLVYKGILPCSTMVAVKKIEESNSQGDAEFYSEVEIISNLKHRNLVPLRGCCVVDEEKDPEYRRNQRYLVYDYMPNGSLEDHLFPPLDNQNAKKLLTWPQRKSIILDVANGLVYLHFGIKPAIYHRDIKATNILLDAGMRARVADFGLAKQSSESSSQLITRVAGTHGYLAPEYALYGQLTEKSDVFSFGVVILEIMCGRKALDFSSSGTPAFFITDWVWSLMKSGNLREALDASILMDENSTRNIIERFLLVGILSSHVIAASRPTILDALKMLEGDIDVPPIPDMPVTLGHHNYVDFREK* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2287 627 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 612 - -
Dod04g2287 627 Gene3D Transferase(Phosphotransferase) domain 1 399 605 - -
Dod04g2287 627 ProSiteProfiles Protein kinase domain profile. 314 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2287 627 SUPERFAMILY Protein kinase-like (PK-like) 293 601 IPR011009 -
Dod04g2287 627 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 30 612 - -
Dod04g2287 627 ProSitePatterns Protein kinases ATP-binding region signature. 320 343 IPR017441 GO:0005524
Dod04g2287 627 Pfam SPARK 30 191 IPR043891 -
Dod04g2287 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Dod04g2287 627 Pfam Protein kinase domain 317 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2287 627 CDD STKc_IRAK 320 602 - -
Dod04g2287 627 Gene3D Phosphorylase Kinase; domain 1 280 398 - -
Dod04g2287 627 SMART serkin_6 314 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2287 Dod-Chr4 46735563 46737780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2287 26 621 Receptor kinase-like Gene Family AT1G11050 57.903 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Dod04g2287 Pkinase 8.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2287 - - gmx:100788367 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0072 03 916845 917942 Dod04g2287 04 46735563 46737780 PCT