Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2279 ATGGGGAAGGGCCCCTTCTCCTTTCGCCGGACAGCCTCCCGCCGCCGTCACAGGAAGACTGTTGGGCCGCCCGAGTCGCCGCCCACTCCCACGCCGCATTCCGCCATAGTCTCCGCTTCGCCGGCCGATAACGCCAACAACGGCGTGATCGCCGGCGGTGGCGGCAACGCGACGACGAAGGCAAAGAAAAAGGCCGGAGGAGCGAGGCTGTGGATGCGGTTCGACCTTACGGGCCAGTCGGAGCTGGTGGAGTGGGACAAGAACGCCATCATTCGCCACGCCGCGATCCCCACCAGGGACCTCAGGATCCTCGGCCCTGTCTTCTCTCACTCCTCCAATATTCTTGCTAGAGAGAAAGCAATGGTAGTTAATTTGGAGTTTATAAAGGCTATAGTCACGGCTGAAGAGGTGCTATTGCTGGATCCTCTTCGTCAGGAGGTTCTTCCATTTGTTGAACAACTCAGGCAACAGCTTCCGTATAAAAGTCAACCTCAGCTTCGCGGGCCTGCAGGTGAACAAGAAAGTGAAATGCAGGTTTCTACTGGCAGACAATGGTTGCCTGTGCCGGAGTCTGCTGATGGTTTGCAGTCTGAGCTTCCATTTGAGTTTCAGGTTTTGGAGATTGCTTTAGAAGTTGTCTGTACTTCTCTGGACTCAAGTGTGGCGGACCTTGAGATAGGTGCTTACCCCATATTAGATGAATTGGCTAGAAATGTTAGCACCAAGAATCTCGAATACGTGCGAAGTTTGAAGAGCGATCTTACCCGTTTGCTGGCACGCGTGCAAAAGGTACGAGATGAAATTGAACATTTGTTAGATGACAATGAAGATATGGCGCAACTATATTTGACAAGGAAGAGGTTGCAGAACCAGCAATTTGATTCTCAAATTGGAGCCACAACCTCAAATAACCTTTCTATTACACGTCGGCTTGGTTCTACCAGGAGTGGAAGTCTTGTGACTAGCAACATTGGGGATGATAATGACGTGGAGGATCTGGAGATGTTGCTTGAGGCATATTTTATGCAGTTGGATGGAACTCGTAACAAGATATTGTCTGTTAGGGAGTATATTGATGACACAGAAGATTATGTCAACATCCAACTTGATAACCATCGAAATGAACTTATTCAGCTGCAGTTGACATTGACCATTGCATCATTTGCTATAGCTGTTGATACCTTGCTTGCTGGTGCATTTGGTATGAACATTCCTTGTTCCCTATATAATACAGAAGGAATATTTTGGCCCTTTGTTTGGAGCAGTTCTGCGGGTTGCATATTGCTTTTCCTGCTTGTAACGGCATATGCAAGATGGAAAAAGTTGCTGGGATCATAA 1338 0.4851 MGKGPFSFRRTASRRRHRKTVGPPESPPTPTPHSAIVSASPADNANNGVIAGGGGNATTKAKKKAGGARLWMRFDLTGQSELVEWDKNAIIRHAAIPTRDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPYKSQPQLRGPAGEQESEMQVSTGRQWLPVPESADGLQSELPFEFQVLEIALEVVCTSLDSSVADLEIGAYPILDELARNVSTKNLEYVRSLKSDLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKRLQNQQFDSQIGATTSNNLSITRRLGSTRSGSLVTSNIGDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAVDTLLAGAFGMNIPCSLYNTEGIFWPFVWSSSAGCILLFLLVTAYARWKKLLGS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2279 445 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 445 IPR039204 -
Dod04g2279 445 Gene3D - 57 142 - -
Dod04g2279 445 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 381 432 IPR045863 -
Dod04g2279 445 MobiDBLite consensus disorder prediction 162 181 - -
Dod04g2279 445 Pfam CorA-like Mg2+ transporter protein 254 438 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Dod04g2279 445 Gene3D Magnesium transport protein CorA, transmembrane region 143 376 - -
Dod04g2279 445 CDD Mrs2_Mfm1p-like 71 442 IPR039204 -
Dod04g2279 445 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 5 445 - -
Dod04g2279 445 Coils Coil 247 281 - -
Dod04g2279 445 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2279 Dod-Chr4 46685541 46689477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2279 1 445 MRS2 Gene Family AT3G58970 65.784 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2279 K16075 - gmx:100812561 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2279 04 46685541 46689477 Dod04g0551 04 7898314 7901022 PCT