Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2273 ATGGAGAGCATTGCCGCGCAGCTGAAGCGCGGCATATCGCGGCAGTTCTCGTCGGGGTCGCTGAGGCGGAACATGAGCAGGCAGTTCTCGCGGCAGGCGTCGCTGGACCCGAGGAGGAACAACCTGAGGTTCAGCTTCGGGAGGCAGTCGTCGCTGGACCCTATCAGGAGGAGTCCGGTGCCGGCGGCGGCGGAGGGGGAGGAGGGAGGGGAGCTGACGGTGCCGGAGAACCTGGACTCGACGATGCAGCTGCTGTTCATGGCGTGCAAAGGGGACGTGAAGGGTGTGGAGGACCTCCTCAACGACGGCACAGACGTCAACAGCATTGACCTCGACGGCCGCACCGCACTCCACATCGCAGCCTGCGAGGGCCACGTCGAAGTCGCCCGCCTCCTCCTCAGCCGCAAGGCCAACATCGACGCTCGTGACCGTTGGGGCAGTACCGCCGCAGCTGATGCCAAATATTATGGAAATACGGAAGTTTATTATATGTTGAAGGCCCGTGGAGCAAAAGTGCCGAAAACCAGGAAGACTCCGATGACTGTTGCGAATCCTCGTGAGGTTCCAGAATATGAACTCAATCCATTAGAACTCCAGGTTCGCAAGAGTGATGGCATTTCAAAGGGAACATATCAAGTAGCTAAATGGAATGGCACAAAGGTTGCAGTGAAGATACTTGATAAGGACAGTTATTCAGATCCTGATAGCATAAATGCCTTCAAACATGAGCTCACATTATTAGAAAGGGTACGGCATCCTAATGTGGTCCAGTTTGTTGGAGCTGTCACCCAGAATGTACCTATGATGATTGTGAGAGAGTACCATGCTAAGGGTGACCTTTCAAGCTATCTTCAAAAGAAAGGCCGTTTGTCCCCATCAAAAACTCTACGGTTTGCTCTTGATATTGCTAGGGGAATGAACTATCTTCATGAATGCAAGCCAGATCCAATTATCCACTGCGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGTCAATTGAAGATAGCTGGATTTGGAAATGTGAGGTTATCGCAAATCTCACTCGATAAAGCAACGCTGGCACACCCTAATTCTAACATCGACCATTCAAGTGTGTACTTGGCTCCAGAGATTTACAGAGATGAGGTATTTGACAGAAGTGTGGATGCATATTCTTTTGGTCTCATCGTATATGAGATGATAGAGGGTGTACAGCCTTTCCATCCCAAGTCCACGGAGGAGGTCTTGAGAATGATGTGCTTAGAAGGGAAAAGACCACTATTCAAGATCAAAACAAAACATTGTCCTCCTGAATTGAAAGAGTTGATTGAGGAATGTTGGGATCCAGAACCTGTTGTCAGGCCAACATTTTCGCAGGTCATTGTACGGTTGGACAGAATTGTTGGCACTTGTTCAAAACAAGGATTTTGGAAAGAAACTTTTAAACTTCCGTGGAAATAA 1446 0.491 MESIAAQLKRGISRQFSSGSLRRNMSRQFSRQASLDPRRNNLRFSFGRQSSLDPIRRSPVPAAAEGEEGGELTVPENLDSTMQLLFMACKGDVKGVEDLLNDGTDVNSIDLDGRTALHIAACEGHVEVARLLLSRKANIDARDRWGSTAAADAKYYGNTEVYYMLKARGAKVPKTRKTPMTVANPREVPEYELNPLELQVRKSDGISKGTYQVAKWNGTKVAVKILDKDSYSDPDSINAFKHELTLLERVRHPNVVQFVGAVTQNVPMMIVREYHAKGDLSSYLQKKGRLSPSKTLRFALDIARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKIAGFGNVRLSQISLDKATLAHPNSNIDHSSVYLAPEIYRDEVFDRSVDAYSFGLIVYEMIEGVQPFHPKSTEEVLRMMCLEGKRPLFKIKTKHCPPELKELIEECWDPEPVVRPTFSQVIVRLDRIVGTCSKQGFWKETFKLPWK* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2273 481 ProSiteProfiles Ankyrin repeat profile. 112 144 IPR002110 GO:0005515
Dod04g2273 481 SMART ANK_2a 112 141 IPR002110 GO:0005515
Dod04g2273 481 SMART ANK_2a 80 108 IPR002110 GO:0005515
Dod04g2273 481 SUPERFAMILY Ankyrin repeat 81 181 IPR036770 -
Dod04g2273 481 SUPERFAMILY Protein kinase-like (PK-like) 209 459 IPR011009 -
Dod04g2273 481 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 479 - -
Dod04g2273 481 Gene3D Transferase(Phosphotransferase) domain 1 276 474 - -
Dod04g2273 481 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 479 - -
Dod04g2273 481 Pfam Ankyrin repeats (3 copies) 86 172 IPR002110 GO:0005515
Dod04g2273 481 CDD STKc_MAP3K-like 206 459 - -
Dod04g2273 481 Gene3D - 60 191 IPR036770 -
Dod04g2273 481 PRINTS Tyrosine kinase catalytic domain signature 430 452 IPR001245 GO:0004672|GO:0006468
Dod04g2273 481 PRINTS Tyrosine kinase catalytic domain signature 383 405 IPR001245 GO:0004672|GO:0006468
Dod04g2273 481 PRINTS Tyrosine kinase catalytic domain signature 272 285 IPR001245 GO:0004672|GO:0006468
Dod04g2273 481 PRINTS Tyrosine kinase catalytic domain signature 311 329 IPR001245 GO:0004672|GO:0006468
Dod04g2273 481 PIRSF ILK 8 480 - -
Dod04g2273 481 MobiDBLite consensus disorder prediction 52 72 - -
Dod04g2273 481 ProSiteProfiles Protein kinase domain profile. 196 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2273 481 Pfam Protein tyrosine and serine/threonine kinase 206 458 IPR001245 GO:0004672|GO:0006468
Dod04g2273 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Dod04g2273 481 SMART serkin_6 200 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2273 481 Gene3D Phosphorylase Kinase; domain 1 193 275 - -
Dod04g2273 481 ProSiteProfiles Ankyrin repeat region circular profile. 112 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2273 Dod-Chr4 46627933 46635243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2273 1 480 MAP Kinase Kinase Kinase AT2G43850 76.875 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Dod04g2273 PK_Tyr_Ser-Thr 4.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2273 - - gmx:100810411 861.292