Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2262 ATGGGTAATTGCTTGTGTAGTTGGGAATCATCAGATTATAGAGTCTCATCTAATGCAAAGTCAGATTCACCAAAAGATCAAAACCTGGCAGCCAAACAAAGGCATGATGATAGAAAGTTACCATCCAATCCCGAAGAAGTAGAAGACCTACGCCGCGCTTCAGCTGCAAATCCATTGATTGCTTTCACTTATGATGAGCTGAAGATAATCACTGGAAATTTTAGGCCAGATCGTGTCTTGGGGGGAGGAGGATTTGGAAGTGTTTATAAAGGTTTTATCTCTGAGGAGTTAAGGCAGGGGCTTCCTACTCTTCCTGTAGCTGTTAAGGTTCATGATGGGGACAACAGTCATCAAGGGCACAGAGAATGGCTGGCAGAAGTCATATTTTTGGGGCAGCTTTCACATCCAAATCTAGTCAAATTAATTGGATACTGCTGTGAAGACAAACATAGGGTGCTAATATATGAGTACTTGGCCCGGGGAAGTGTGGAAAACAATCTGTTCTCCAAAATATTGCTTCCCATGTCATGGTCCATAAGAATGAAGATCGCATTTGGTGCTGCAAAGGGACTAGCATTTCTTCATGAAGCAGAGAAGCCAGTCATCTATCGAGATTTTAAGACATCAAATATTTTATTGGACCTGGACTACAATGCAAAACTTTCTGACTTTGGCCTTGCCAAAGATGGACCAGTTGGAGACAAATCCCACGTTTCTACTCGCATAATGGGAACATATGGGTATGCTGCACCTGAATACATAATGACGGGTCATCTGACCCCTAGAAGTGATGTTTACAGTTTTGGTGTTGTTCTTCTTGAGCTTCTCACTGGAAGAAAATCTCTAGACAAGTTAAGACCTGCAAGGGAGCAGAACCTTGCAGATTGGGCTCATCCTTTGCTGAAGGAAAAGAAGAAATTGCTAAACATCATAGATCCAAGGCTGGATGGTGATTATCCTATAAAAGGAGTTCACAAGGCTGCAATGCTTGCTTATCATTGCTTGAACCGCAATCCAAAAGCAAGGCCTCTAATGCGGGACATTGTAGACTCTTTGGAGCCTTTGCAGGCACACAATGAGGTCACCATTGAGAAAACATTGACCATAATAAGTGAGGTTCCTGGTGTTGATTTAAAAAGGAAAAATGCAGAATGA 1155 0.4225 MGNCLCSWESSDYRVSSNAKSDSPKDQNLAAKQRHDDRKLPSNPEEVEDLRRASAANPLIAFTYDELKIITGNFRPDRVLGGGGFGSVYKGFISEELRQGLPTLPVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDKHRVLIYEYLARGSVENNLFSKILLPMSWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRKSLDKLRPAREQNLADWAHPLLKEKKKLLNIIDPRLDGDYPIKGVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQAHNEVTIEKTLTIISEVPGVDLKRKNAE* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2262 384 MobiDBLite consensus disorder prediction 9 26 - -
Dod04g2262 384 PANTHER OS01G0588500 PROTEIN-RELATED 9 365 - -
Dod04g2262 384 MobiDBLite consensus disorder prediction 9 49 - -
Dod04g2262 384 Gene3D Phosphorylase Kinase; domain 1 37 157 - -
Dod04g2262 384 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 9 365 - -
Dod04g2262 384 ProSitePatterns Protein kinases ATP-binding region signature. 80 109 IPR017441 GO:0005524
Dod04g2262 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Dod04g2262 384 SMART serkin_6 74 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2262 384 Pfam Protein tyrosine and serine/threonine kinase 77 352 IPR001245 GO:0004672|GO:0006468
Dod04g2262 384 ProSiteProfiles Protein kinase domain profile. 74 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2262 384 MobiDBLite consensus disorder prediction 27 49 - -
Dod04g2262 384 SUPERFAMILY Protein kinase-like (PK-like) 50 352 IPR011009 -
Dod04g2262 384 Gene3D Transferase(Phosphotransferase) domain 1 158 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2262 Dod-Chr4 46479450 46484380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2262 21 352 Glycoside Hydrolase AT3G07070 47.368 8.29e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod04g2262 PK_Tyr_Ser-Thr 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2262 - - gmx:100775722 678.707