Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2257 ATGGCGCTTTCTATGCATAGAGAGTCTTCTTCATCAAACAAGCACATGAACATCGACAGTAACAAGTATGTGAGGTATACAGCAGAGCAGGTGGAAGCATTGGAAAGAGTGTATGCTGAATGTTCAAAGCCAAGTTCCTCAAAAAGGCAACAGCTCATTAGGGAGTGCCCCATCCTTGCTAATATCGAACCTAAACAGATCAAAGTCTGGTTTCAGAACCGCAGATGTCGTGACAAGCAGAGGAAGGAAGCTTGTCGTTTGCAGTCAGTGAATAGAAAGCTGACTGCGATGAATAAGTTGTTAATGGAAGAAAATGATCGACTGCAGAAGCAAGTCTCGCAGTTGGTTTGTCAAAATGGATACACAAAGCAACAATTACACACGGTATCTGGTGCTACTAAAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAACACCAACAACGAAACCCAACAACTCAGCATCCTCAGTTGGATGCAAACAACCCAGCTGGTCTTCTCGCAATTGCTGAGAAGACCTCGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCAACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCAGATTCTATTGGAATCGTTGCTGTTTCCCGCAGCTGTAGTGGGGTAGCAGTACGAGCTTGTGGCCTTGTGAGCCTAGAGCCCACAAAGGTTGCCGAGATTCTTAAAGATCGTCCATCATGGTACCGTGATTGCCGATGTCTTGATGTATTGAGCATAGTCCCCACAGGGAATGGGGGCAAAATAGAGCTCATGTACATGCAGACTTATGCACCTACAACATTGGCATCAGCAAGAGACTTCTGGACACTGCGATACACTACAAGTTTGAAGGATGGAAGTCTTGTGATTTGTGAGAGATCACTGAATTCTTCAACTGGCGGCCCTACAGGGCCTCTTGCTTCAGACTTTGTAAGAGCTGAAATGCTTCCTAGTGGCTATCTAATCAGAGCATGTGATGGTGGTGGATCTATTATTCACATTGTTGATCATGTTGATTTAGATATTTGGAGTGTTCCTGAGGTACTGAGGCCCCTCTATGAATCATCTAAATTCTTGGCTCAGAAAGTGACTATTGCTGCCTTGCGACATATAAGACAAATTGTGCAAGAATCAAATGGAGAAGTTCATTGTAGTGGGGGACGCCAACCTGCTGTCTTGAGGACGTTTAGTCAGAGGCTTTGCAGGTAA 1224 0.4534 MALSMHRESSSSNKHMNIDSNKYVRYTAEQVEALERVYAECSKPSSSKRQQLIRECPILANIEPKQIKVWFQNRRCRDKQRKEACRLQSVNRKLTAMNKLLMEENDRLQKQVSQLVCQNGYTKQQLHTVSGATKDNSCESVVMSGQHQQRNPTTQHPQLDANNPAGLLAIAEKTSAEFLSKATGTAVNWVQMIGMKPGPDSIGIVAVSRSCSGVAVRACGLVSLEPTKVAEILKDRPSWYRDCRCLDVLSIVPTGNGGKIELMYMQTYAPTTLASARDFWTLRYTTSLKDGSLVICERSLNSSTGGPTGPLASDFVRAEMLPSGYLIRACDGGGSIIHIVDHVDLDIWSVPEVLRPLYESSKFLAQKVTIAALRHIRQIVQESNGEVHCSGGRQPAVLRTFSQRLCR* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2257 407 Coils Coil 87 118 - -
Dod04g2257 407 CDD START_ArGLABRA2_like 164 379 - -
Dod04g2257 407 CDD homeodomain 22 82 IPR001356 GO:0003677
Dod04g2257 407 SMART HOX_1 19 85 IPR001356 GO:0003677
Dod04g2257 407 ProSiteProfiles START domain profile. 160 361 IPR002913 GO:0008289
Dod04g2257 407 ProSiteProfiles 'Homeobox' domain profile. 17 81 IPR001356 GO:0003677
Dod04g2257 407 Pfam START domain 170 377 IPR002913 GO:0008289
Dod04g2257 407 CDD bZIP 74 113 - -
Dod04g2257 407 Gene3D - 12 87 - -
Dod04g2257 407 SMART START_1 169 379 IPR002913 GO:0008289
Dod04g2257 407 Gene3D - 199 386 IPR023393 -
Dod04g2257 407 SUPERFAMILY Bet v1-like 170 381 - -
Dod04g2257 407 Pfam Homeodomain 22 80 IPR001356 GO:0003677
Dod04g2257 407 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 8 407 - -
Dod04g2257 407 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 8 407 IPR044830 GO:0003700
Dod04g2257 407 SUPERFAMILY Homeodomain-like 22 83 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2257 Dod-Chr4 46437139 46440310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2257 3 407 Homeobox Transcription Factor Family AT1G30490 77.340 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod04g2257 START 2.8e-49 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2257 K09338 - gmx:100779499 692.575