Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2251 ATGAAGCTATTCAGCCTTCTAGTGTTTTTGTTGTCTTTCTTCTCTGTCATGGGACAGCTTCCTTCCAAGGACATTTTAGCATTGCTAGAATTTAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTCCTCAATTCATGGAATGAGGAATCCACTGATTTTCATGGATGCCCATCTTCATGGAACGGAGTATTGTGTAATGATGGTAGTATTGCTGGGGTTGTCCTTGATAACCTTGGTTTGTCTGCTGATGCTGACTTGAGTGTTTTTTCAATCCTCACAAAGCTTGTAAAACTCTCTATGTCCAACAATTCAATATCAGGAAAACTTCCTAACAACATTGCTGACTTTAAGAGCCTTGAATTTCTAGATGTATCCAATAATCTTTTCTCTTCATCCTTACCAATGGGAATTGGTAAGTTAGCTACCTTGAGGAATCTGTCATTGGCAGGAAATAAATTCTCCAGCTCAATTCCTGACTCTATTTCAGGAATGGCTTCAATTCAATCTTTAGACTTGAGCCGCAATTCATTTTCTGGAGCACTGCCAGCATCGTTGACTAAGCTGACTAGCCTGATGTTGCTTAATTTATCTCACAATAGCTTCACTGGAGAAATTCCCAAAGGTTTTGAGCTGATTTCTTCTCTTGAAAAGCTTGACTTGCATGGGAATATGCTTGATGGTCAATTAGACATCGAGTTTATACTTTTTTCAAGTGCCAGCTATGTTGATTTTAGTGACAACATGCTGGTGAGTTCTAATTCACAGCAGCAGAAGTTTCTACCCAGAATATCTGAAAGCCTCAAATATTTGAATCTAAGCCACAACCAGCTTACCGGGTCATTGGTTAGGGGAAGTGAGCGACCAATTTTTGAAGACTTGAATGTGTTGGACCTGAGCTACAATCAATTGTCAGGAGAATTGCCCGGGTTTGATTTTGTTTATGAACTACTAGTCCTTAAACTCAGCAACAACAGATTTTCAGGATTTATTCCGACTGGCCTGCTAAAAGAAGACTCTCTGGTTTTAACTGAACTTGATTTGAGTAGCAATAATCTGTCAGGGCCAATAAGTATAATAACATCAACAGCACTGCACTTTCTTAATCTCTCATCAAATGGTTTAACTGGTGAATTGCCACTCCTCACTGGAAGCTGTGCTGCACTTGATTTGTCAAATAACAAACTAGAAGGAAATTTAAACAGGATGATGAAATGGGGGGATATTGAATTTCTTGATCTCAGTAGGAATCACTTGACAGGACCCATCCCTCAGGTAACCCCTCAATGTTTGCGATTAAATTATCTGAATCTCTCCCATAATTTTCTTAGCAGCTTCCTCCCAAGAGTCTTAGCCCAGTATACAAAGCTTAGAGTGCTTGATCTTAGTTCCAACCTGTTAGATGGGCCTTTTCTAGCTGGTATTCTTGCACTACCCACTTTGCAAGAGCTCCATCTTGAAAACAATATGATCTCTGGTGGCATTAATTTATCATCCTCTTCTCATGTTCAGTCGGATCTCCGGATTCTTGAACTTTCTCATAACCAGTTTAATGGTCCTTTTCCTGTTTGGTTTGGGTCATTAACTGGCCTGAAAGTGCTCAATATTGCTGCAAATAATTTTTCTGGTTCTCTTCCAACTACCTTTGCTGGCATGACTTCACTGGACGACTTGGATATATCAGGGAATCATTTTATAGGTCCTTTACCAATTAACATGCCAAAGGGGCTCAAAAACTTTAATGCTTCCAACAATGATCTGTCTGGGGTTGTCCCACAAAATCTTAGGAAGTTTCCTAGTTCTTCTTTCTACCCTGGGAATGTTAGGTTACATTTTCCAAATGTTCCTTCTGGATCAAGCAATAAACCACATGAAGGTTCCAATAGAAAGCCAATAAGCATTATCGTTAGAGTAATAATTATAGTGTCATGTGTGGTTGCTCTCTTCATATTAATCCTGCTTGCTGTCTTCATATACTACAAACGAGCATCAAGATCTCCACCTGGATATGCTACAAGTACGGATATAAGTGGACGTGCTCAATCGCACATTGCTGGCCGTGGTAATCCAAAACAGTTTGCCGGTACTCTAACTGTATCATCTGAGGATGTTGTTACCTCACGGAAAGGATTGTCAGCAGAGATAACCAGCCCTGATGAAAATAAGGCATCTGTGTCTGGGATCTCCCCATCAAAAAATAGTCCCTTTTCATCACCAGGGTCTAGTGATTCATCTGCTGCTGAAAATATTACAAGACTATATGCAAGATCACCAGATAAGTTGATAGGAGAGCTGCATTTTTTTGATGATACAATAAAACTGACACCTGAGGAGCTCTCAAGGGCCCCAGCTGAGGTTTTGGGCAGAAGCAGTCATGGTACATCTTACAAGGCAATTCTGGAGAATGGTTTATTATTGAGAGTTAAGTGGCTGAGAGAAGGAGTGGCAAAACATAGAAAAGAATTCGCTAAAGAGGCTAAAAAATTTGCAAACATCAGGCATCCCAATGTTGTGGGGTTCAGAGGGTACTATTGGGGTCCTGCACAGCATGAGAAGCTTATTCTAACAGATTATATCTCTCCGGGAAGTCTTGCAAGTTTTCTATATGATCGATCAGGAAGAAAAGTTCCACCATTGACTTGGGCACAGAGGCTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTCTGAACATGCTGTTCCTCACGGGAACCTCAAAGCAACAAATGTGTTGCTAGATTCAACTGAATTGAATGCACGTGTAGCTGACTACTGCCTCCACAGACTCATGACTCAGGCTGGTGCTATTGAACAGAATCTTGATGCTGGGTTCTTGGGTTACCGTGCACCAGAGTTGGCTGCTTCCAAGAAGCCATTGCCCTCCTTCAAGTCAGATGTTTATGCTTTTGGGGTGACACTTACGGAACTTTTAACTGGAAGGTGTGCTGGTGATGTGATATCTGGTGAAAAGGAAGGTGTTGATCTAACAACCTGGGTTCGGTTGCGTGCCACAGAAGGTAGAGGCTCAGAATGTCTTGATGCTGCTTTGAAGCCAGAAATGCGTAATTCAGTTGCAGAAAAGGGCATAAACCAGGTCCTTGAAATAGCTATTTGTTGCTTAAGATCTGTTTCCGAGAGGCCAAGTATTAAGACTGTATATGAAGAGCTTTCTTCTATATAG 3192 0.411 MKLFSLLVFLLSFFSVMGQLPSKDILALLEFKKGIKHDPTGYVLNSWNEESTDFHGCPSSWNGVLCNDGSIAGVVLDNLGLSADADLSVFSILTKLVKLSMSNNSISGKLPNNIADFKSLEFLDVSNNLFSSSLPMGIGKLATLRNLSLAGNKFSSSIPDSISGMASIQSLDLSRNSFSGALPASLTKLTSLMLLNLSHNSFTGEIPKGFELISSLEKLDLHGNMLDGQLDIEFILFSSASYVDFSDNMLVSSNSQQQKFLPRISESLKYLNLSHNQLTGSLVRGSERPIFEDLNVLDLSYNQLSGELPGFDFVYELLVLKLSNNRFSGFIPTGLLKEDSLVLTELDLSSNNLSGPISIITSTALHFLNLSSNGLTGELPLLTGSCAALDLSNNKLEGNLNRMMKWGDIEFLDLSRNHLTGPIPQVTPQCLRLNYLNLSHNFLSSFLPRVLAQYTKLRVLDLSSNLLDGPFLAGILALPTLQELHLENNMISGGINLSSSSHVQSDLRILELSHNQFNGPFPVWFGSLTGLKVLNIAANNFSGSLPTTFAGMTSLDDLDISGNHFIGPLPINMPKGLKNFNASNNDLSGVVPQNLRKFPSSSFYPGNVRLHFPNVPSGSSNKPHEGSNRKPISIIVRVIIIVSCVVALFILILLAVFIYYKRASRSPPGYATSTDISGRAQSHIAGRGNPKQFAGTLTVSSEDVVTSRKGLSAEITSPDENKASVSGISPSKNSPFSSPGSSDSSAAENITRLYARSPDKLIGELHFFDDTIKLTPEELSRAPAEVLGRSSHGTSYKAILENGLLLRVKWLREGVAKHRKEFAKEAKKFANIRHPNVVGFRGYYWGPAQHEKLILTDYISPGSLASFLYDRSGRKVPPLTWAQRLKIAVDVARGLNYLHSEHAVPHGNLKATNVLLDSTELNARVADYCLHRLMTQAGAIEQNLDAGFLGYRAPELAASKKPLPSFKSDVYAFGVTLTELLTGRCAGDVISGEKEGVDLTTWVRLRATEGRGSECLDAALKPEMRNSVAEKGINQVLEIAICCLRSVSERPSIKTVYEELSSI* 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2251 1063 Gene3D Transferase(Phosphotransferase) domain 1 860 1063 - -
Dod04g2251 1063 Pfam Leucine Rich repeat 343 355 IPR001611 GO:0005515
Dod04g2251 1063 Pfam Leucine Rich repeat 267 280 IPR001611 GO:0005515
Dod04g2251 1063 Pfam Leucine rich repeat 412 467 IPR001611 GO:0005515
Dod04g2251 1063 Pfam Leucine rich repeat 170 226 IPR001611 GO:0005515
Dod04g2251 1063 Pfam Leucine rich repeat 507 565 IPR001611 GO:0005515
Dod04g2251 1063 Gene3D Ribonuclease Inhibitor 146 256 IPR032675 -
Dod04g2251 1063 SUPERFAMILY RNI-like 98 586 - -
Dod04g2251 1063 SMART LRR_typ_2 528 551 IPR003591 -
Dod04g2251 1063 SMART LRR_typ_2 117 141 IPR003591 -
Dod04g2251 1063 SMART LRR_typ_2 189 212 IPR003591 -
Dod04g2251 1063 SMART LRR_typ_2 93 116 IPR003591 -
Dod04g2251 1063 SMART LRR_typ_2 314 338 IPR003591 -
Dod04g2251 1063 SMART LRR_typ_2 165 188 IPR003591 -
Dod04g2251 1063 SUPERFAMILY RNI-like 206 399 - -
Dod04g2251 1063 PANTHER - 6 1063 - -
Dod04g2251 1063 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Dod04g2251 1063 Gene3D Ribonuclease Inhibitor 257 621 IPR032675 -
Dod04g2251 1063 ProSiteProfiles Protein kinase domain profile. 781 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2251 1063 Gene3D Ribonuclease Inhibitor 23 145 IPR032675 -
Dod04g2251 1063 PANTHER OS07G0626500 PROTEIN 6 1063 - -
Dod04g2251 1063 Pfam Protein tyrosine and serine/threonine kinase 785 986 IPR001245 GO:0004672|GO:0006468
Dod04g2251 1063 Gene3D Phosphorylase Kinase; domain 1 765 858 - -
Dod04g2251 1063 SUPERFAMILY Protein kinase-like (PK-like) 784 1060 IPR011009 -
Dod04g2251 1063 MobiDBLite consensus disorder prediction 711 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2251 Dod-Chr4 46370861 46374810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2251 4 1063 Receptor kinase-like Gene Family AT3G02130 26.920 5.90e-68 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod04g2251 PK_Tyr_Ser-Thr 2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2251 - - ccaj:109802185 1535.39