Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2222 ATGCCTCGTAAAGTAAACTACGGACTCGATTACGACGATGGTTATTATGATGACTTTGACAACTATGATGATTATGATGTTGACATAGAAGAAGACTATGAAGAAGGTCCTGGTACAAAGCAAGAGACCAGTAGGCCTGGGCTCTGGCGGTGCTCCATTTGCACTTATGACAATGATGAGGGCATGACTTCTTGTGATATTTGCGGTGTTCTGCGACATCCCTTGTTTGACACTGGAACTGCCAATCGTAACAAAACAGTTGAAGACATAAGCAAAACATCTGGAGCATCCAAGTTGGCCAGGTCTCTTTTTGCTTCATTACCACAACAGAATCCCAATGACGTTGTATTATTTCCAAAGCAGAATGATGGCTTTCAGACAGATGGCAGTAACTTCTACAAGCTTGGGAATGTCCAAGGAGAATTTCATGAATTTCATAAGGCTTTCCTTGCTAAAAGCCATTTAAGCATAGCTCCTTTCAAGTTTGATGTTCCATCCCCTGATGATGTGGTTTATACTGGTCTGAATTCTTCCAAAACAGGATTGAAAGAAAAAGTTACCAACTCTAAAACTTCTCGGGTTTCATCAAGCATCACGGAGAAGAATGAACTTTCTGTGCAATCAAATGCTGAAAGTTTAGACAACATATCATCATTAATCCGAAAGAGCAAGCAGGATAGTTTGGCTGACAACAAACTTCCCAAAAGTGCGGCAGTTCATCTGGAAACAAGTGTTAAAACTTCAAATGTGAATAACAAAAATGGTGCAGTTGATATTCAATCAAGGAAGGGAAAGTCAGGTAGTTCGTCTGCAATGCCAAAAGTCAAAGATGGTGATGACATTCGTCTGTCATCTATTAAAGAGGGAAAACCTGACTGTCTTTCCAGCAGTTTTAGCAACATGGTTGTTGATGTAAGATCTGGAAATTCAGATAAGACTAATAATAGTGCTAAGGGACCTCGTCCACAAGTTTCTTACAAACCAGAAAAATGGATGCTTCCTCAACAAGCTGAAGATGCGTTGACTCAGCTGAATCTTGCGATTGTTGGCCATGTTGATTCTGGAAAATCAACACTCTCAGGCAGGTTACTACACCTAATGGGGCGAATTTCCAAGAAAGAAATGCACAAATTTGAAAAGGAGTCCAAGTTACAGGGCAAGGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGCTCTGAAGAAAGAGAAAGGGGAATAACTATGACAGTGGCTGTTGCTTATTTTGACACTAAGAAATATCATGTTGTTGTGCTTGACTCCCCCGGCCACAAAGATTTTGTCCCAAACATGATTTCTGGGGCAACACAGGCTGATGCTGCAATTCTTGTTATAGATGCCTCACTTGGTTCATTTGAAGCTGGTATGGATGGTAGCAAGGGACAAACTAGGGAGCATGCACAACTTATCAGAAGCTTTGGGGTTGATCAGGTTATAGTTGCAGTAAATAAGATGGATACTGTAGCTTACTCCAAAGATCGATTTGATCTTATCAGACGGCAGTTGGGAATGTTTCTCCGCTCGTGTGGTTTCAAAGATTCTTCCGTGTCATGGATTCCTATGAGTGTGATGGAAAATCAAAATTTGGTGGCGGTCCCTTCAGATGCTCATTTCAAAAGCTGGTATAATGGACCGTATCTATTAGATGCAATTGACTCACTTCAACCACCCACTAGAGAATTCTCAAAACCTCTAATAATGCCGATATGTGATGTGATCAAATCACCTACACTTGGACAGGTGTCTGCTTGTGGTAAATTGGAAGCAGGAGCTCTTCGGGGTGGATCAAAGGTCTTAGTCATGCCTGCCTCTGTTGTGGGAACAGTGCGGTCATTGGAGCGGGACTCTAATTCCTGCACCATTGCAAGAGCTGGAGATAATGTAGCTGTAACGTTGCAAGGTGTTGATGGAAGTCATGTGATTGCAGGGGGTGTAATATGCCATCCGGACTTCCCTGTTGCAGTTGCAAAGCATTTGGAGTTGAAAGTGCTTGTATTGGATGGTGCAAGTCCCATATTGGTGGGCTCTCAGCTAGAGTTTCATATACACCATGCAAAGGAGCCTGCTAGAGTTTCAAGAATATTGTCAGTACTTGACCCCAAGACTGGTAAGGTGACCAAAAAGTCACCTCGCTGTCTCACTGCAAAGCAAAGTGCAGCAATGGAGGTGATTTTGCAAGAGCCAGTTTGTGTGGTAGAGTTCTCAAGTTGTAAAGCTCTTGGAAGGGTGTCCCTAAGAACACTAGGAAGAACAATTGCTGTTGGACTTGTGACCAGAATAATTAAAGAGCAAGAATAG 2319 0.4235 MPRKVNYGLDYDDGYYDDFDNYDDYDVDIEEDYEEGPGTKQETSRPGLWRCSICTYDNDEGMTSCDICGVLRHPLFDTGTANRNKTVEDISKTSGASKLARSLFASLPQQNPNDVVLFPKQNDGFQTDGSNFYKLGNVQGEFHEFHKAFLAKSHLSIAPFKFDVPSPDDVVYTGLNSSKTGLKEKVTNSKTSRVSSSITEKNELSVQSNAESLDNISSLIRKSKQDSLADNKLPKSAAVHLETSVKTSNVNNKNGAVDIQSRKGKSGSSSAMPKVKDGDDIRLSSIKEGKPDCLSSSFSNMVVDVRSGNSDKTNNSAKGPRPQVSYKPEKWMLPQQAEDALTQLNLAIVGHVDSGKSTLSGRLLHLMGRISKKEMHKFEKESKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGMDGSKGQTREHAQLIRSFGVDQVIVAVNKMDTVAYSKDRFDLIRRQLGMFLRSCGFKDSSVSWIPMSVMENQNLVAVPSDAHFKSWYNGPYLLDAIDSLQPPTREFSKPLIMPICDVIKSPTLGQVSACGKLEAGALRGGSKVLVMPASVVGTVRSLERDSNSCTIARAGDNVAVTLQGVDGSHVIAGGVICHPDFPVAVAKHLELKVLVLDGASPILVGSQLEFHIHHAKEPARVSRILSVLDPKTGKVTKKSPRCLTAKQSAAMEVILQEPVCVVEFSSCKALGRVSLRTLGRTIAVGLVTRIIKEQE* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2222 772 MobiDBLite consensus disorder prediction 306 325 - -
Dod04g2222 772 Gene3D - 332 565 IPR027417 -
Dod04g2222 772 PANTHER TRANSLATION FACTOR 51 770 - -
Dod04g2222 772 ProSitePatterns Zinc finger RanBP2-type signature. 49 68 IPR001876 -
Dod04g2222 772 SUPERFAMILY Translation proteins 563 658 IPR009000 -
Dod04g2222 772 CDD EF1_alpha 345 564 - -
Dod04g2222 772 CDD HBS1_C_III 659 767 - -
Dod04g2222 772 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 341 572 IPR000795 GO:0003924|GO:0005525
Dod04g2222 772 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 664 768 IPR009001 -
Dod04g2222 772 SMART zf_4 47 71 IPR001876 -
Dod04g2222 772 MobiDBLite consensus disorder prediction 244 268 - -
Dod04g2222 772 Gene3D Translation factors 662 772 - -
Dod04g2222 772 ProSiteProfiles Zinc finger RanBP2 type profile. 45 74 IPR001876 -
Dod04g2222 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 586 IPR027417 -
Dod04g2222 772 Pfam Elongation factor Tu GTP binding domain 344 560 IPR000795 GO:0003924|GO:0005525
Dod04g2222 772 PRINTS GTP-binding elongation factor signature 424 434 IPR000795 GO:0003924|GO:0005525
Dod04g2222 772 PRINTS GTP-binding elongation factor signature 485 494 IPR000795 GO:0003924|GO:0005525
Dod04g2222 772 PRINTS GTP-binding elongation factor signature 404 412 IPR000795 GO:0003924|GO:0005525
Dod04g2222 772 PRINTS GTP-binding elongation factor signature 345 358 IPR000795 GO:0003924|GO:0005525
Dod04g2222 772 PRINTS GTP-binding elongation factor signature 440 451 IPR000795 GO:0003924|GO:0005525
Dod04g2222 772 MobiDBLite consensus disorder prediction 244 280 - -
Dod04g2222 772 PANTHER OS04G0595300 PROTEIN 51 770 - -
Dod04g2222 772 SUPERFAMILY Ran binding protein zinc finger-like 46 72 IPR036443 -
Dod04g2222 772 Pfam Elongation factor Tu C-terminal domain 660 767 IPR004160 -
Dod04g2222 772 Gene3D Translation factors 569 658 - -
Dod04g2222 772 MobiDBLite consensus disorder prediction 306 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2222 Dod-Chr4 46090920 46098601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2222 47 84 Eukaryotic Initiation Factors Gene Family AT5G10630 65.789 2.15e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2222 K14416 - gmx:100801724 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0683 03 8510591 8514105 Dod04g2222 04 46090920 46098601 PCT