Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2205 ATGGGCTTCAATGAAACTGAGTTCAATGTGAGTTCTTATCAACTAATTAAACTTTTCATTCAGCTACCTGTCTTTTGTATTGAATACAACATACTATGCAGCTCTCTACTTGTTAATCGTTTATCAGGGGAAATTCCTGAGGAGTTAGGAAATATTACTGCTCTGACATACCTGGATGTCAGTTTTAATAAGTTGGTTGGGGAAATTCCAGCCACTGAACATGTGGGGCATCTGAGATTTCTCTTCTTAACTGGCAACAAACTAAGTGGTAACATACCTGACTCAGTCTTGATGGATGGAAATTCTAAACCTTGTTCGGACCAGAAAAAAGGAACAAGTATTATAGTCGTTGGAGTTGCATTTGGAGTTGCGGCTCTTTGCCTAGTCCTTATTATAGTAGGAATATTTTGGTGGAAAGGCTGCTTCAAAGGAATAAATAGGAGAAAAACAGGTGTAGATGGACAAGATTCTCAAACAGGGACATTTACATTCAAACAAATTAAAGCTGCCACATATGATTTCAGTCCAGCTAACAAGATTGGGGAAGGTGGTTTTGGCCCTGTCTACAAGGGTCAGTTGTCTGATGGTACTTGGGTAGCAGTCAAACAACTTTCATCAAAGTCACGGCAGGGGAACCGTGAATTTTTAAATGAGATAGGCATCATATCTTGTTTGCAACACCCTAATCTTGTGAAGCTTCATGGATGTTGCGTTGAAATGGATCAACTAATAGGATATATGGCACCGGAATATGCATTATGGGGTTACCTGACTTACAAGGCTGACGTTTACAGTTTTGGAGTTGTAGTCTTGGAAATTGTCAGTGGGAAGAACAATAATGATTACTTGCCAAGTGATAGTTGTGTTTGTCTTTTAGACAAGGTTGCAAGCAGGTCCAATCCAAATGATGAATTGGACTAG 921 0.3941 MGFNETEFNVSSYQLIKLFIQLPVFCIEYNILCSSLLVNRLSGEIPEELGNITALTYLDVSFNKLVGEIPATEHVGHLRFLFLTGNKLSGNIPDSVLMDGNSKPCSDQKKGTSIIVVGVAFGVAALCLVLIIVGIFWWKGCFKGINRRKTGVDGQDSQTGTFTFKQIKAATYDFSPANKIGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIGIISCLQHPNLVKLHGCCVEMDQLIGYMAPEYALWGYLTYKADVYSFGVVVLEIVSGKNNNDYLPSDSCVCLLDKVASRSNPNDELD* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2205 306 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 95 - -
Dod04g2205 306 Gene3D Phosphorylase Kinase; domain 1 143 243 - -
Dod04g2205 306 Pfam Protein tyrosine and serine/threonine kinase 244 283 IPR001245 GO:0004672|GO:0006468
Dod04g2205 306 Pfam Protein tyrosine and serine/threonine kinase 178 242 IPR001245 GO:0004672|GO:0006468
Dod04g2205 306 SUPERFAMILY L domain-like 35 95 - -
Dod04g2205 306 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RFK1-RELATED 135 242 - -
Dod04g2205 306 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RFK1-RELATED 33 95 - -
Dod04g2205 306 Gene3D Transferase(Phosphotransferase) domain 1 244 304 - -
Dod04g2205 306 SUPERFAMILY Protein kinase-like (PK-like) 159 280 IPR011009 -
Dod04g2205 306 ProSiteProfiles Protein kinase domain profile. 174 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2205 306 Gene3D Ribonuclease Inhibitor 6 107 IPR032675 -
Dod04g2205 306 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RFK1-RELATED 245 294 - -
Dod04g2205 306 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 245 294 - -
Dod04g2205 306 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 135 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2205 Dod-Chr4 45880781 45889117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2205 90 251 Receptor kinase-like Gene Family AT1G29750 56.173 1.95e-49 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod04g2205 PK_Tyr_Ser-Thr 2.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2205 - - vra:106779815 227.254