Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2191 ATGGACGAAGCTCAGGGAAGTTCCAGTTCCCTGCCTCCTTTCCTGGCAAAGACTTATGAGATGGTGGATGATCCTTCCTCTGATCCCATTGTTTCCTGGAGTGCCACTAATAGAAGTTTCATTGTGTGGAATCCTCCCGATTTCGCGAGGGACTTGCTGCCAAGATTCTTTAAGCACAATAACTTCTCAAGTTTTATCAGGCAGCTGAACACCTATGGGTTCAGGAAAGTTGACCCGGAACAATGGGAATTTGCAAATGATGATTTTGTGAGAGGGCAACCACATCTTATGAAGAATATCCATAGACGAAAGCCAGTTCATAGCCATTCTATACAGAATCTCCAATCGCAAGCTCCACTAGCAGAATCAGAAAGGAAGAGTTTAAGTGATGAAATAGAGAGGCTTAAACATGACAAAGAACAGCTTCTTATGGATCTACAGGGGCATGAACATGAGTGGCAAATGTATGAGATTCAACTACATTGCTCTAAAGATCGTTTGGAGCAGTTGGAGCAGAGGCAACAAAAGATGATCTCATCTGTCTCCCAAGTATTGCAGAAGCCTGGGATTGCACTAAATCTCTTGTCACTGACCGAAACCACGGATAGAAAACGAAGGTTGCCGAGAGGTGGCTACTTTGGTGATGAGGCTAACATTGAAGATGCTATTGACACTTCCCAAATGGTACCCATAGAAAATGCAGAGAATACCTCTGTTTTGGCATTAAACATGGAGCGGTTGGATCAGCTTGAGTCATCCATATTATTTTGGGAAACTATTTCACGCGATGTTCCTGATACCTCAGTTCACATTCATTCAAACATGGATTTTGATGAATCTACAAGTTGTCCAGATACTATGTCCATATCTTGTGAGCAACTAGATGTTGAAGTTCAGCCTAAGTCATCTGGAATTGACATGAACTCTGAGCCAGCTGCTACTGCTGTTCCTGATCCTGAGCCTGTTGCAACAAAGGTACCACCTGCAGGTGCAACTGCGGTGGCAACCGGTGTTAATGATGTATTCTGGGAACAGTTCTTGACAGAGAATCCTGGTTCATCCGAAGCACAGGAAGTGCAGTCAGAAAGAAAGGATTATGATGGCAGCAAGAATGAGGGAAAACCTAGTGACCTCGGTAAATTTTGGTGGAACACGCGAAATACAGCTAATCTTTCGGAACATATGGGGCATGTTAGTCAAGCAGAGAGAACTTAG 1215 0.437 MDEAQGSSSSLPPFLAKTYEMVDDPSSDPIVSWSATNRSFIVWNPPDFARDLLPRFFKHNNFSSFIRQLNTYGFRKVDPEQWEFANDDFVRGQPHLMKNIHRRKPVHSHSIQNLQSQAPLAESERKSLSDEIERLKHDKEQLLMDLQGHEHEWQMYEIQLHCSKDRLEQLEQRQQKMISSVSQVLQKPGIALNLLSLTETTDRKRRLPRGGYFGDEANIEDAIDTSQMVPIENAENTSVLALNMERLDQLESSILFWETISRDVPDTSVHIHSNMDFDESTSCPDTMSISCEQLDVEVQPKSSGIDMNSEPAATAVPDPEPVATKVPPAGATAVATGVNDVFWEQFLTENPGSSEAQEVQSERKDYDGSKNEGKPSDLGKFWWNTRNTANLSEHMGHVSQAERT* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2191 404 MobiDBLite consensus disorder prediction 109 123 - -
Dod04g2191 404 Gene3D - 6 104 IPR036388 -
Dod04g2191 404 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 385 IPR027725 -
Dod04g2191 404 SUPERFAMILY "Winged helix" DNA-binding domain 9 103 IPR036390 -
Dod04g2191 404 MobiDBLite consensus disorder prediction 358 374 - -
Dod04g2191 404 Coils Coil 167 187 - -
Dod04g2191 404 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g2191 404 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g2191 404 MobiDBLite consensus disorder prediction 106 127 - -
Dod04g2191 404 MobiDBLite consensus disorder prediction 350 382 - -
Dod04g2191 404 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g2191 404 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g2191 404 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g2191 404 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-4C 1 385 - -
Dod04g2191 404 Coils Coil 111 152 - -
Dod04g2191 404 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2191 Dod-Chr4 45498852 45500179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2191 7 404 HSF AT4G18880 52.078 9.26e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod04g2191 HSF_DNA-bind 6.7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2191 K09419 - gmx:100798004 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2191 04 45498852 45500179 Dod03g0589 03 7115171 7116780 PCT