Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2189 ATGATGATGAAGTGGGTTGGAAGAAAACCATCTTCTGCTTCCGCTTCTTCTAAGCCTTCTTTCATCTCTCAAGTGTCTCCTTTTTCATGGCTGTCAAAGTTCAAGCAGATGAGGATCAATTCAGATCCAAAACATGGAAAAATGAAGCAGAATGCAAAGCAGAATTCTCCTTCTGGTTGTTCACCACCACCACAGGATGCATGTGGGAATAGAGGTAGGTTTTATGGAGGGGATGATGATGATGCTTTCTGGAGACTGTCATTCAGTGAAGTGAGCCATGACCATAAGAAAGTTGAAGATGTTATAGAACCAGCAGTGCACAAGAGGGATGATGAGCATGTCATTCAGTCATCAACTTGCACCAGTGGTAGTAGATTGAATGATAAAAGGCATGGAAGAAGAGAAGGCACTCTGAGGTTCAAGCAGAAGGATATTGGGCTGGGAGAAGAAAGAAAGTTTCCAAATGAAACAAAGACTTCACTGGGGATGGATGAGTGTAATGGGGAAAAGGAATTTGAATACTTGAGGAGGAAATATGAGAGGAAAGCACAGAGAGTTTTGCAAGAGCAACTCTTGAAACTAGAAAGCGCCAGAGTTGAAGCTGAATTTGCATCAAGCAAATGTAAATCCTTGGAAAAGGATGTGCTGCAATTTGAATCACCTAGAACAATTTGTACACCAAGAGCACATTTGTTTACCTCTTCTGCGGATTCAAAGAACTCTAGTCTTGCAAAAATTAGAGAAGCTGAGAAAACTGACAGATTCTCTGAGAAGAAATTGGGCTCTGATTGGCAGAAATTGAGACAAACTGAAGAGTTGAAAGTGAAGGCTAACAAAAAAAGGCAATCAGTACATGTGAGCAGAGAAGTGCAGAGGAGGAAACCAAGGCACAGCCCCAGGGTCAGAGTACATTCTCCAAGGATGGCTTCAAAGGTCGAAATCTGCAAAATAAAGGCCATAGAAGACATGAAGAGAGCAAAACTGAAGATGAAGAAAGAAGAGGAAATTGTGGAGGAAACAGCAGGCTTAGACAGCTTTGCTGTGGTGAAGTGCTCATTGGATCCACAACAAGACTTCAGAGATTCGATGATTGAGATGATCACAGAGAAAAAGATCAGCCAGCCAGAAGAAATGGAGGAGCTGCTAGCATGCTATCTGACACTGAATTCTAATGAGTATCATGATCTCATCATCAAAGTATTCCGGGAGGTATGGTTGTGTGTGAACCAAGCTAGTTTAGGCCTCAGATCAGACAAGCAATGTCGTTGA 1269 0.4216 MMMKWVGRKPSSASASSKPSFISQVSPFSWLSKFKQMRINSDPKHGKMKQNAKQNSPSGCSPPPQDACGNRGRFYGGDDDDAFWRLSFSEVSHDHKKVEDVIEPAVHKRDDEHVIQSSTCTSGSRLNDKRHGRREGTLRFKQKDIGLGEERKFPNETKTSLGMDECNGEKEFEYLRRKYERKAQRVLQEQLLKLESARVEAEFASSKCKSLEKDVLQFESPRTICTPRAHLFTSSADSKNSSLAKIREAEKTDRFSEKKLGSDWQKLRQTEELKVKANKKRQSVHVSREVQRRKPRHSPRVRVHSPRMASKVEICKIKAIEDMKRAKLKMKKEEEIVEETAGLDSFAVVKCSLDPQQDFRDSMIEMITEKKISQPEEMEELLACYLTLNSNEYHDLIIKVFREVWLCVNQASLGLRSDKQCR* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2189 422 MobiDBLite consensus disorder prediction 290 304 - -
Dod04g2189 422 Coils Coil 194 214 - -
Dod04g2189 422 ProSiteProfiles OVATE domain profile. 348 407 IPR006458 -
Dod04g2189 422 PANTHER TRANSCRIPTION REPRESSOR OFP4 12 416 - -
Dod04g2189 422 MobiDBLite consensus disorder prediction 36 70 - -
Dod04g2189 422 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 347 406 IPR006458 -
Dod04g2189 422 MobiDBLite consensus disorder prediction 275 305 - -
Dod04g2189 422 MobiDBLite consensus disorder prediction 275 289 - -
Dod04g2189 422 MobiDBLite consensus disorder prediction 1 22 - -
Dod04g2189 422 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 416 IPR038933 GO:0045892
Dod04g2189 422 Pfam Transcriptional repressor, ovate 352 407 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2189 Dod-Chr4 45490106 45491494 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod04g2189 Ovate 1.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2189 - - aprc:113859996 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2189 04 45490106 45491494 Dod03g0588 03 7107777 7109033 PCT