Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2176 ATGGATACAAAGTACAGCAACAACAACAAGAGCAACTCATATGTCAATGAACAAGATCAGGACATTGATGCAGCCCAAGAAAACATTGCCGAGTCCCCTCCTTCTTCCACCGTCTTTAACATCGATGGCTTGGTATCTTCCCCAACTTCTTCAAGTAAGAGAAGGCGAGCGACACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAGACAGACGGCCCAAGGCTAAAAGGAGAGAGCAACACTCCACCCTCCGATTCATGGGCATGGAGAAAGTACGGCCAGAAACCCATCAAAGGTTCCCCTTACCCCAGGTACTTAATTGCATATATAGTTAACACATATAGAAGAAGCTAG 354 0.4605 MDTKYSNNNKSNSYVNEQDQDIDAAQENIAESPPSSTVFNIDGLVSSPTSSSKRRRATQKRVVQIPIKETDGPRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRYLIAYIVNTYRRS* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2176 117 Pfam WRKY DNA -binding domain 85 105 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2176 117 PANTHER WRKY TRANSCRIPTION FACTOR 65-RELATED 9 104 - -
Dod04g2176 117 MobiDBLite consensus disorder prediction 1 89 - -
Dod04g2176 117 SMART WRKY_cls 83 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2176 117 MobiDBLite consensus disorder prediction 1 53 - -
Dod04g2176 117 Gene3D WRKY domain 55 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g2176 117 ProSiteProfiles WRKY domain profile. 84 104 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2176 117 SUPERFAMILY WRKY DNA-binding domain 81 105 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g2176 117 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 104 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2176 Dod-Chr4 45376124 45376960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2176 21 104 WRKY Transcription Factor Family AT1G29280 59.524 2.26e-26 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod04g2176 WRKY 1.8e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2176 - - gmx:100793777 175.637