Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2158 ATGAAGCCCTGTTGCTGGTTCTTAATTCTTGTAGCGCTGTTTTCTCTGGTAGAATCTTCATGTAACAGTGCAGAGCAGCGCTTAGTGGCAAAGGCTTTCAAATCAATCTCCGGGTTCAACGCTTCCACCTGGTTCCAAACAGGAGTTATTAACTGTTCAGGGGCTCATGTTAGCACAATAATGCTTCCATCGAGAAACTTAAGCGGAACAGTTTCATGGGTTAATCTGAGGAACATGTCAAAGTTGCAGGTTCTTGATCTCTCCGGGAATTCCCTGCAAGGCTATGTCCCAAGCTGGTTCTGGTCAAGCACAACCTTAAAGGAAGTGAACCTCTCAAGGAACAGGTTCGGAGGTAGCATCGTTGGGTCGTCGAAACACCAACCTTCATCAGGAAACACCTCGTTTTCATCATCAATTCAGATGCTCAACCTCTCACACAACAGGTTCACCAACTTGGTTCATCTCTCATCAGCTGGGTTCCAAAACCTTGAAATCCTCGACCTTTCTCACAACGAGCTGGGAGCACTCCCCTCAGAGTTCCAAAACCTCACCAAGCTACAACACCTCGACATCTCAAGCTGCAACCTCAAAGGCACCGCAAAACCCATCTCCTCCTTACGCTCACTCCTCTACCTTGACTTATCAAACAACAACTTAACAGGCACTTTTCCCTCGGATTTCCCTCCGCTCAACACTCTCAACTTCTTCAACATCTCAGTCAACAACTTCACTTCAACCGTTAGCCTCAACAAGTTCAGCAAATTCAGCAAAACGGCGTTCATCCACGCCGGCAACAACTTCACCTACATCAACAGCAGCAGCAGCAACAACAACAACAACAACGCATCCAAAACCCCATCACCATTACAGCCCCACGTTCAGAAACAATTCATTCATAGAAAACCGAGGCACAAATCCAAAGAACTGATTATCGCCGTGTCATGTGCGTTATCAGCGCTTGTTCTGGTGGTGTTGTCCATTTGGGTTCTCCGCATTGTTCACAGGAAGAGGAAGCAGCGTTGCAAGAGGAACAAATGGGCAATCTCGAGACCGGTCCCACATGGCATCCACGGAAGCGTGGTGGAGAAATCAGGACCGTTCGCGTTCGAGACGGAGTCAGGGTCAACGTGGGTGGCTGATCTCAAGGAGCCATGTTCTGCGCCCGTGGTGATGTTCGAGAAGCCGTTGATGAGCCTCACCTTCAGGGACCTCATCGTTGCCACCTCACACTTCGGCAAGGACTCACTCCTCGCCGAGGGAAGGTGTGGCCCAGTCTACAGGGCTGTGTTGCCCGGTGACCTCCACGTGGCAATCAAGGTCCTCGAACACGCCAGAGACGTTGATGCTGATGACTCTGTTGCCACATTCGTTGACCTCTCTAGACTCAAGCACCCAAACCTGTTGCCCCTCTCCGGTTACTGCATTGCAGGTAAAGAGAAGCTGGTATTGTACGAGTTTATGGCAAACGGCGATTTGGGAAGGTGGCTACACGAGCTTCCGACAGGGGACACCAACGTGGAGGACTGGAGTCGTGACACGTGGGAGATCCAAAACGGCGTAGCGGAAGGGCCCTCAGAAAAGATGAGGTGGCTGACACGGCACCGTATTGCGGTGGGGATAGCGCGTGGCTTAGCTTATCTCCACCACGCGGGTTCGAAACCCGTGGTGCACGGCAACCTCGTGACCTCCAACATTTTACTCGCCGACGATTTCGAGCCCCGGATCGCCGATTTCGGGTTGCGGGGCGACCCGGACCCGAGTTGCGGTACCGAGGGTGACGTGTACTGCTTCGGGGTGGTGCTGGTTGAGATGTTGACGGGGAAGGGCGGCACGGCGGAGACGGTGGCCGCGGTGAGGAAGGCCGTGAGGGAAGGGAACGGCGTTAGGGTTCTGGAAGAGAGGCTGCGACTCAGCGGTGACTCGGTGAGCGAGATGGTGGAGAGCCTCCGAGTCGCGTACCTTTGCACGGCCGAGTCACCTTCCAAGAGGCCCACCATGCAGCAGGTTTTGGGATTGCTCAAAGACATTCGTCCACACCACCGACTCATCCCGAGTTGA 2058 0.5316 MKPCCWFLILVALFSLVESSCNSAEQRLVAKAFKSISGFNASTWFQTGVINCSGAHVSTIMLPSRNLSGTVSWVNLRNMSKLQVLDLSGNSLQGYVPSWFWSSTTLKEVNLSRNRFGGSIVGSSKHQPSSGNTSFSSSIQMLNLSHNRFTNLVHLSSAGFQNLEILDLSHNELGALPSEFQNLTKLQHLDISSCNLKGTAKPISSLRSLLYLDLSNNNLTGTFPSDFPPLNTLNFFNISVNNFTSTVSLNKFSKFSKTAFIHAGNNFTYINSSSSNNNNNNASKTPSPLQPHVQKQFIHRKPRHKSKELIIAVSCALSALVLVVLSIWVLRIVHRKRKQRCKRNKWAISRPVPHGIHGSVVEKSGPFAFETESGSTWVADLKEPCSAPVVMFEKPLMSLTFRDLIVATSHFGKDSLLAEGRCGPVYRAVLPGDLHVAIKVLEHARDVDADDSVATFVDLSRLKHPNLLPLSGYCIAGKEKLVLYEFMANGDLGRWLHELPTGDTNVEDWSRDTWEIQNGVAEGPSEKMRWLTRHRIAVGIARGLAYLHHAGSKPVVHGNLVTSNILLADDFEPRIADFGLRGDPDPSCGTEGDVYCFGVVLVEMLTGKGGTAETVAAVRKAVREGNGVRVLEERLRLSGDSVSEMVESLRVAYLCTAESPSKRPTMQQVLGLLKDIRPHHRLIPS* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2158 685 Gene3D Transferase(Phosphotransferase) domain 1 487 584 - -
Dod04g2158 685 PANTHER KINASE, PUTATIVE-RELATED 4 682 - -
Dod04g2158 685 Gene3D Ribonuclease Inhibitor 22 130 IPR032675 -
Dod04g2158 685 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 682 - -
Dod04g2158 685 PRINTS Leucine-rich repeat signature 163 176 - -
Dod04g2158 685 PRINTS Leucine-rich repeat signature 206 219 - -
Dod04g2158 685 ProSiteProfiles Leucine-rich repeat profile. 162 184 IPR001611 GO:0005515
Dod04g2158 685 Gene3D Phosphorylase Kinase; domain 1 371 486 - -
Dod04g2158 685 ProSiteProfiles Protein kinase domain profile. 411 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2158 685 MobiDBLite consensus disorder prediction 272 292 - -
Dod04g2158 685 Gene3D Ribonuclease Inhibitor 131 298 IPR032675 -
Dod04g2158 685 Gene3D Transferase(Phosphotransferase) domain 1 585 682 - -
Dod04g2158 685 Pfam Leucine rich repeat 66 116 IPR001611 GO:0005515
Dod04g2158 685 Pfam Leucine rich repeat 138 196 IPR001611 GO:0005515
Dod04g2158 685 SUPERFAMILY Protein kinase-like (PK-like) 401 679 IPR011009 -
Dod04g2158 685 SUPERFAMILY RNI-like 54 266 - -
Dod04g2158 685 Pfam Protein tyrosine and serine/threonine kinase 415 581 IPR001245 GO:0004672|GO:0006468
Dod04g2158 685 SMART LRR_typ_2 79 102 IPR003591 -
Dod04g2158 685 SMART LRR_typ_2 206 229 IPR003591 -
Dod04g2158 685 SMART LRR_typ_2 160 182 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2158 Dod-Chr4 45195333 45198798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2158 60 676 Receptor kinase-like Gene Family AT5G07280 31.061 7.92e-72 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Dod04g2158 PK_Tyr_Ser-Thr 4.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2158 - - gmx:100788556 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2158 04 45195333 45198798 Dod03g0553 03 6640615 6643898 PCT