Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2118 ATGATTATGGACTTCCAAGTGGTAGTTCTGGCCGGTGGCGTCTCCAAGAAACTCATCCCTCTCGTTTCCAAGGAGGTTCCAAACGCTCTGCTTCCGGTGGCGAACCGCCCCCTTCTCTCTTACGTGCTCGAGTTATTGGAGCTCAGCAACCTTAAAGATCTCATTGTGGTAGTTGAAGGTGAAGATGCGGCTCTTCATGTTGGGGGTTGGATATCAGGGGCTTATGCTGATCGCCTCCATGTTGAGGTTGCTGCAGTTCCTGAGGATGTAGGAACAGCTGGCGCTATTCGGGCCATTGCGCACCACCTAACTGCAAAAGACATATTGGTTGTCAGTGGTGATCTTGTTTCTGATGTGCCACTTGGTGCTGTTACAGCTACTCATAGGCAGCATGATGCCGTTGTCACTGCTATGCTTTGCTCTGCTCCTGTAAGTGGCCCTTTGGAGTCAGGATCTTCCGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATGACTTAATAGGACTGGATCCCACACATCGGTTTTTACTTCACATAGCAACTGGAGCTGAAGTTGAAAAGGATCTTAGAATCCAGAAGAGTATACTCCGTGCAGCTGGCCAGATGGAAATAAGAGCTGATCTAATGGATGCCCACTTGTATGCGTTCAAAAGATCAGTTCTACTAGAAGTTCTAGACCAGAAGGCTACATTTCATAGTTTAAAGCATGATGTATTGCCATATCTTGTCCGGAGCCAACTGAAATCAGATGTATTCTTAAATGGTATACCACAAGCAGAAGAAAACGGATCCAAGAAAGTTATTTCGCAAAGCAATCAACAAATACTATCTCAAATACTTGCTAATGCATCCGAGCCAACCTTTCATCTACGATATGCACTGGTTCCAAATGGCACTTCTGTTCAAAGAACCCATAAATGCTGCATTTATATTGCTGGAAGCAGCAAGTACTGTGCTCGCTTAAATTCTATACAAGCATATAGTGACATAAATCGAGACGTGATAGGAGAGGCCAGTCACTTGTCAGGGTATTCCTTCTCTGCTCAAAACAACATTATCCATCCTTCTGCAGAGCTTGGGGCAAAAACAACTGTAGGACCACACTGTATGCTGGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTTAAACGGTCTGTCATTGGCCGTCACTGTAGGATAGGTGCCAACGTTAAGGTGGGATGA 1209 0.4591 MIMDFQVVVLAGGVSKKLIPLVSKEVPNALLPVANRPLLSYVLELLELSNLKDLIVVVEGEDAALHVGGWISGAYADRLHVEVAAVPEDVGTAGAIRAIAHHLTAKDILVVSGDLVSDVPLGAVTATHRQHDAVVTAMLCSAPVSGPLESGSSGGKDKTKKPGRYDLIGLDPTHRFLLHIATGAEVEKDLRIQKSILRAAGQMEIRADLMDAHLYAFKRSVLLEVLDQKATFHSLKHDVLPYLVRSQLKSDVFLNGIPQAEENGSKKVISQSNQQILSQILANASEPTFHLRYALVPNGTSVQRTHKCCIYIAGSSKYCARLNSIQAYSDINRDVIGEASHLSGYSFSAQNNIIHPSAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVG* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2118 402 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 350 IPR029044 -
Dod04g2118 402 SUPERFAMILY Nucleotide-diphospho-sugar transferases 2 399 IPR029044 -
Dod04g2118 402 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 3 401 - -
Dod04g2118 402 Pfam Nucleotidyl transferase 8 145 IPR005835 GO:0009058|GO:0016779
Dod04g2118 402 SUPERFAMILY Trimeric LpxA-like enzymes 343 402 IPR011004 -
Dod04g2118 402 CDD eIF-2B_gamma_N 5 222 - -
Dod04g2118 402 Gene3D Hexapeptide repeat proteins 351 402 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2118 5 399 Eukaryotic Initiation Factors Gene Family AT2G34970 21.860 7.15e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2118 K03241 - gmx:100783346 682.559