Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2090 ATGCGGTGCTCCTACGGGTTAACCATCCCAGGAAGCGACCACCGGTTCTGCGTCCCCACCGCAACTCCGGTGTTCCTGAGGCCCAGTGGGCCCATCAAATGCCCGGCCGGGATATCACTCGGGTTCGGGCCCCCGAAGCCCAGAGCAACCCTAAACGGCGCCGCGGAGGAGGAGGCTGCTCCAGCAGCTTCAGCTTCGGAGCTGAGCTTCTACGAGCTGCTGGGGATTGAGGAATCGGGATCGATGACGGAGATCAAGCAAGCGTACAAGCAGCTTGCCCGAAAGTACCACCCGGACGTGTCTCCTCCGGGTCGGATGGACGAGTACACGAAACGGTTCATTCGGGTTCAGGAAGCGTACGAGACTTTGTCTGATCCCTCGAGGAGGGCCATGTACGATAGAGACATGGCCAGGGGGGTTCACTTCGCATTCAACGCTCGTAGAAGCTACCACTACGATGATCAGGTGATTGAACATAAAAGTGAATGGAAAGCTCGTTGGCAATCTCAACTGTCTGAACTGAAAAGAAGAAGTAAGAACAAGGATGCTGGAGGGAATATGTCATGGGCAGCTCGAATGCGCCAGCAGAGGCATGGGTCACCAAATGAATTATGA 615 0.5593 MRCSYGLTIPGSDHRFCVPTATPVFLRPSGPIKCPAGISLGFGPPKPRATLNGAAEEEAAPAASASELSFYELLGIEESGSMTEIKQAYKQLARKYHPDVSPPGRMDEYTKRFIRVQEAYETLSDPSRRAMYDRDMARGVHFAFNARRSYHYDDQVIEHKSEWKARWQSQLSELKRRSKNKDAGGNMSWAARMRQQRHGSPNEL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2090 204 CDD DnaJ 70 125 IPR001623 -
Dod04g2090 204 SUPERFAMILY Chaperone J-domain 66 147 IPR036869 -
Dod04g2090 204 Gene3D DnaJ domain 54 161 IPR036869 -
Dod04g2090 204 PRINTS DnaJ domain signature 71 89 IPR001623 -
Dod04g2090 204 PRINTS DnaJ domain signature 108 128 IPR001623 -
Dod04g2090 204 PRINTS DnaJ domain signature 89 104 IPR001623 -
Dod04g2090 204 MobiDBLite consensus disorder prediction 174 204 - -
Dod04g2090 204 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 58 200 - -
Dod04g2090 204 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
Dod04g2090 204 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 58 200 - -
Dod04g2090 204 Pfam DnaJ domain 70 133 IPR001623 -
Dod04g2090 204 SMART dnaj_3 68 128 IPR001623 -
Dod04g2090 204 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2090 Dod-Chr4 44548040 44550404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2090 60 133 C2H2 Transcription Factor Family AT1G74250 38.961 1.33e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2090 - - adu:107482289 305.064