Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2084 GGATGTCGCGAGGAAGTTGACTTTGTGTGTTCTTGTTTTCATTTGATTTCTAGGCCACAGTATACAGAAATTGAAAAAATTGTTGAAAGAGTTTCAAACAAATTAGATTGCAAATTATCAAGTTTGGATGGTCTAGTTGGAATCCACTCTCGTGTAGAACAAGTAGAAAAGCTTTTGGACTTGGACTCCACTGATGAAGTTCGAGTTCTAGGCATTTGTGGGATGGGTGGAACAGGAAAGACAACTCTTGCTAAACAGTGTAGGATAGAAACTCTCATTGATATGGTGCTACTTGCTATATTGACGATGTTGCGTCGGGTGAAGACTTTCGTTGTCCTTGACAATGTTGATAAAATTGAGCAACTTGAGAATTTGTGTATGGATCATGAATGTCTATGTCCAGGAAGTAGAATCATCATAATTTCTAGAGATCGGCAGATCTTAAATAATTTTGGAGTGGATGATATTTATGTTGCTCAACTCTTGAATATGGATGACGCTTCTCAATTGTTTTGTAGAAAAGCTTTTAAATGTGATTATATCATGAGTCGTGATGACCTTAGCAGAGAGTATGAAGTGTTGACAGATCTAGCCCTAATTTACTGTGAATGCCTTCCCTTGGCAATTAAAGTTTTGGGATCATTTCTATTTGGCAAAAATATTTCTGAGTGGCGAAGTGCTTTGGCTAGACTAAGGGATAATCCAAATAAAGATATTATGGATGTGCTTCAAACTAGTTTTGATGGATTGGAACCAATGGAAAAGGAAATATTTTTTGATATTGCTTGCTTTTTCAACTATGAATCCAAAAATAAGGTGGAAGAATCTCTAGAGTGTTGTGGATTTCATCCAAAGATTGGAATCAGAGTTCTTATTGATAAATCACTTATAATCGTTAGTTATCATGGTCTAATTATAATGCATGACATGCTACGAGAGTTGGGCAAGAAAATTGTTCGGCAAGATGCACCAAATGAACGTTGGAAGTGGAGTAGAATATGGCTCTATGAGGATTTCCGCATTATTATGTCTAAAAACATGGTAAACTAG 1050 0.3619 GCREEVDFVCSCFHLISRPQYTEIEKIVERVSNKLDCKLSSLDGLVGIHSRVEQVEKLLDLDSTDEVRVLGICGMGGTGKTTLAKQCRIETLIDMVLLAILTMLRRVKTFVVLDNVDKIEQLENLCMDHECLCPGSRIIIISRDRQILNNFGVDDIYVAQLLNMDDASQLFCRKAFKCDYIMSRDDLSREYEVLTDLALIYCECLPLAIKVLGSFLFGKNISEWRSALARLRDNPNKDIMDVLQTSFDGLEPMEKEIFFDIACFFNYESKNKVEESLECCGFHPKIGIRVLIDKSLIIVSYHGLIIMHDMLRELGKKIVRQDAPNERWKWSRIWLYEDFRIIMSKNMVN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2084 349 Pfam NB-ARC domain 100 237 IPR002182 GO:0043531
Dod04g2084 349 PRINTS Disease resistance protein signature 69 84 - -
Dod04g2084 349 PRINTS Disease resistance protein signature 202 216 - -
Dod04g2084 349 SUPERFAMILY "Winged helix" DNA-binding domain 238 339 IPR036390 -
Dod04g2084 349 Gene3D - 161 251 IPR042197 -
Dod04g2084 349 Gene3D - 33 89 IPR027417 -
Dod04g2084 349 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 86 IPR044974 GO:0006952
Dod04g2084 349 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 40 86 - -
Dod04g2084 349 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 103 346 - -
Dod04g2084 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 261 IPR027417 -
Dod04g2084 349 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 103 346 IPR044974 GO:0006952
Dod04g2084 349 Gene3D - 90 158 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2084 Dod-Chr4 44453935 44455484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2084 46 334 WRKY Transcription Factor Family AT5G45050 31.003 4.08e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2084 - - ahf:112792657 369.007