Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2082 ATGTCATCCGTGTTGATTATTGTCAACGGTCCTAAACATATTATTCAGATATCAAAGAACTCTGCTGAGTGTTTCGACCCACCTTCCCTAGAAATAGCGTCCGAGGCTCCACTTACCAACTCAAACCACAAGACACGGCCACAGTTCAGAGAAACTGAAAAAATTGTTAAAAGGGTTACGAGCATATTGGGTAACAATTTTTCATGTCTTCCAGAAGATCTAGTTGGGATGCACTCCCATGTGGATGAATTGGAAAAGCCTCTTGTCTTGGACTTTCCTGACGATGTTCAAGTCATAGGGATATGGGGGATGGGTGGAGTAGGAAAGACAACTCTTGCTAGAGTGTTGTATCATAGATTCTCCCATGAATATGATGCTTCTTGTTTTATTGACGATGTAAGTAAAGTTTATCGTGACCATGGTCTACTTGGTGTACAAAAACAACTTCATTGTCAAATTCTAATTGAAGAAAATCAAGAGGTGTGGAATATTTCCAAGGCATCCTATTTGACAAGAACTATTCTATCCAAGGTAAAGGCCTTTATTGTCCTTGATAATGTTGATGGAGTGGAACAATTGGAGGGATTGGCCATCAATCGTAAGTTGCTATGTACAGGAAGTAAAATTATTGTTGTTTCTAGAAATAAGCATATCTTGGAACAATTTGGGGTGAATAAGTTTATCAAGTTAAATGCTTGA 699 0.3848 MSSVLIIVNGPKHIIQISKNSAECFDPPSLEIASEAPLTNSNHKTRPQFRETEKIVKRVTSILGNNFSCLPEDLVGMHSHVDELEKPLVLDFPDDVQVIGIWGMGGVGKTTLARVLYHRFSHEYDASCFIDDVSKVYRDHGLLGVQKQLHCQILIEENQEVWNISKASYLTRTILSKVKAFIVLDNVDGVEQLEGLAINRKLLCTGSKIIVVSRNKHILEQFGVNKFIKLNA* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2082 232 Pfam NB-ARC domain 79 228 IPR002182 GO:0043531
Dod04g2082 232 Gene3D - 56 230 IPR027417 -
Dod04g2082 232 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 54 225 - -
Dod04g2082 232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 230 IPR027417 -
Dod04g2082 232 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 54 225 IPR044974 GO:0006952
Dod04g2082 232 PRINTS Disease resistance protein signature 174 188 - -
Dod04g2082 232 PRINTS Disease resistance protein signature 98 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2082 Dod-Chr4 44447139 44449031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2082 75 232 WRKY Transcription Factor Family AT5G45050 31.646 3.48e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2082 - - mtr:MTR_4g080777 217.238