Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2077 ATGGACGGAGCGCCGCCATCTTCTGCCGCCGGCGCCGGCGGAGCAGGAGGAGGTCCGGCGCCTTTCCTCCTGAAGACGTACGACATGGTGGACGATTCTTCAACCGACGACATCGTTTCATGGAGCTCCACCAACAACAGCTTCGTCGTTTGGAACCCGCCGGAGTTCGCTCGCCTTCTTCTCCCTACCTATTTCAAGCACAACAACTTCTCCAGCTTCATCCGCCAGCTCAATACCTATGGATTTCGAAAAATACATCCTGAACGGTGGGAGTTTGCTAATGATGATTTTGTCAAAGACCAAAAGCATCTTCTTAAGAATATTCACCGCAGGAAACCCATCCACAGTCATAGTCATCCTCCAGGTTCTCTTGTGGATCAAGAAAGGGCAGCATTGGATGAAGAAATTGAGAAACTAACACGTGAGAAATCTTCTGTTGAATCTAATATTTACAGATTCAAACAGCATCAATCAACAGCGAAGGTTCAGCTGGAAGATTTTCAGCAACGATTAGATGATATGGAGAAGAGGCAGAAACATTTGCTGAACTTTTTCGAGAAGGCTCTTCAGAATCCTGCTTTTGTTGAGCAGCTTTCCCGGAAAATTGAGTCCATGGATTTAGCAGCATATAATAAGAAAAGACGATTGCCTCAGGCTGATAACTTGCAGCCCGTTGCTGAAAGTAGTTTTGTTGACAATCATAGCAATTTTAGAACGGACTTTGGGAATGTTTTCCATCAAGATTTCTCGGATAAACTCAGACTGGAATTGTCACCATCTGTTTCAGATATGAACTTAGTCTCACGTAGCACACAAAGTTCAAATGAAGATGGAGAAAGCCCACAGAAGATGCAATCTGAAGGAGAACCAAAAGGAGTGCAGACAAGAACAGCTGTTACATTTGCACCTGAAACATTAGAGCTTGCAGATACTGGAGCATCTTTTACTTTTAAGATGGATTCGTGTTTATCACAAAGAGCACCGACTGCTGACAGCCCAAAACTGCACTCTATGGAGCCTAGCAGTGAAGAAGGTGATAGTCATATATCCTGCCAACTTACTCTGGCATCTTGCCCATTTCAAGTCAACAGGAATTCATACTCAGCTAGATCACCCCAAATAGACTGTCAAGAAATTGGCAAATTGGTGGAGTCAAGATTTCATGCCAATGGTAAAGAATCTGACAGTGGAGCTTTCTCAAACAGAAATCAAGCTAATGAGGTTACCAATTTAGCTTCCTCACTGGAGACTCCAAGTAACAATCAAGTTACGCCAGCTGCTCCAAATAGGGTGAATGATATGTTTTGGGAACAGTTCCTTACTGAAAGACCAGGCTGTTCAGACAATGAAGAGGCAATATCCAACTACAGAGCAAGCCCATATGATGAGCAAGATGAAGGGCGGTCAGTTCATGGAATGGCAAGAAACGTTAAGAACATGGATCAGCTCACACTTTAA 1458 0.4396 MDGAPPSSAAGAGGAGGGPAPFLLKTYDMVDDSSTDDIVSWSSTNNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIHPERWEFANDDFVKDQKHLLKNIHRRKPIHSHSHPPGSLVDQERAALDEEIEKLTREKSSVESNIYRFKQHQSTAKVQLEDFQQRLDDMEKRQKHLLNFFEKALQNPAFVEQLSRKIESMDLAAYNKKRRLPQADNLQPVAESSFVDNHSNFRTDFGNVFHQDFSDKLRLELSPSVSDMNLVSRSTQSSNEDGESPQKMQSEGEPKGVQTRTAVTFAPETLELADTGASFTFKMDSCLSQRAPTADSPKLHSMEPSSEEGDSHISCQLTLASCPFQVNRNSYSARSPQIDCQEIGKLVESRFHANGKESDSGAFSNRNQANEVTNLASSLETPSNNQVTPAAPNRVNDMFWEQFLTERPGCSDNEEAISNYRASPYDEQDEGRSVHGMARNVKNMDQLTL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2077 485 MobiDBLite consensus disorder prediction 326 346 - -
Dod04g2077 485 PRINTS Heat shock factor (HSF) domain signature 60 72 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g2077 485 PRINTS Heat shock factor (HSF) domain signature 22 45 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g2077 485 PRINTS Heat shock factor (HSF) domain signature 73 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g2077 485 SUPERFAMILY "Winged helix" DNA-binding domain 18 111 IPR036390 -
Dod04g2077 485 MobiDBLite consensus disorder prediction 264 294 - -
Dod04g2077 485 Gene3D - 17 112 IPR036388 -
Dod04g2077 485 Pfam HSF-type DNA-binding 22 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g2077 485 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 481 IPR027725 -
Dod04g2077 485 Coils Coil 157 177 - -
Dod04g2077 485 SMART hsfneu3 18 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g2077 485 Coils Coil 129 149 - -
Dod04g2077 485 ProSitePatterns HSF-type DNA-binding domain signature. 61 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g2077 485 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 15 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2077 Dod-Chr4 44383037 44385647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2077 1 485 HSF AT4G13980 53.441 9.07e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod04g2077 HSF_DNA-bind 2e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2077 K09419 - gmx:100786408 803.127