LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g2071	ATGAATACTAATTCAAGAAACTGGGGATGGGCTAGAAAGGCCCAATGGAAATGGCTTGTAACTTCTGCTCTTCTTTTACTGCAAAACTTTCTAGTCCTCTCTCAGATATTTGCTGATGAGGCAACAAGCTCCGTGCATATTGTGTACATGGGAGATAAGATGTATGATAGTCCTGACACTACTAGAAAGTATCACCACAAAATTTTATCTTCACTCCTAGGAAGCAAAGAAGCTGCAAAGAATTCAATTCTTTACAGCTATAAGCACGGATTTTCAGGGTTTGCTGCAAGACTGACAAAATATCAAGCAGAGGAAATAGCTAAGTTTCGTGGGGTAGTTTCTGTCATTCCAAACCGAATTCACAAACTCCACACAACCAGAAGTTGGGACTTCATTGGCATCCATCATCCCTCCTCAAACACTGCTTCCACTGAAAGAAACTTGGGCGAAGGAACCATCATAGGTGTCATAGACACAGGAATTTGGCCAGAGTCCAAAAGTTTTAATGATGAAGCAGTGGGACAAATCCCATCAAGGTGGAAAGGAGTTTGTCAAGTTGGGGAGCAATTCAACTCCACAAATTGCAACAAGAAGATCATAGGCGCTCGATGGTTCATAAAAGGACTAAGTGATCATAACAAGAAGCTCATCCATGGAAATGACACCGGAGAATTCCTCTCAGCGCGAGACGCTATTGGCCATGGAACTCATACGGCTTCCACAGCAGCCGGGTACTTTGTAGGGAATGCAAATTATAAAGGACTTGCTTCTGGTTTAGCCAGAGGAGGAGCACCCCTTGCTCACTTAGCCATCTACAAGGCATGCTGGGGCATTCCTTTTGGAGGCTGCACAGATGCTGATATCCTGAAGGCTTTTGACAAAGCTATACATGATGGAGTAGATGTCTTAACTGTTTCTATTGGCCTTAGCATTCCTTTGTTTTCATATGTTGATCAACGCGACACGATAGCAATTGGTTCCTTTCATGCAACTGCCGAGGGAATCACAGTCATATGTTCTGCTGGGAATTCTGGTCCCACGTCTCAAACTGTTGCAAACACTGCACCATGGCTCATTACAGTTGCAGCCAGCACAATAGATAGGGCCTTTCCAGCAGCCATAACTCTTGGAAATAACCGCACTGTGTGGGGTCAGTCCATTGATATTGGAAAGCATGGTCTTGGATCTGTTGGCCTCACATACTCTGAACGCATTGCTTTAGACCCTGATGATGATTTAGCCAAGGATTGTCAGCCTGGAAGTCTGAATGCTACAATGGCAGCAGGCAGAATTGTTCTGTGCTTTTCGCTATCAGATCAACAGGATATCGTTTCTGCGTCGCTTGCAGTAGAGGAAGCTGGAGGAGTTGGACTAATCTATGCACAATTTCATGAAGATGGACTCAATTCGTGTGGTTCCTTTCCATGTATTAAGGTAGATTATGAAGTGGGGACACAAATATTGTCCTATATTAGGAGAGCAAGGTTTCCAACTGCAAGCCTAAGTTTTCCAAAGACTCTTATTGGAAAATGGACTTCTCCCCGGGTAGCATCTTTCTCATCTAGAGGACCCAGTAGCATGTCTCCAACTGTGTTAAAGCCTGACATAGCAGCACCAGGTGTGGACATTTTGGCTGCATTTCCACCAGAGGGCACTACAAAGAAAACAGGCTTTGCATTCTTATCTGGAACTTCAATGTCTAGTCCCCATGTGGCAGGAATAGCAGCTCTCATCAAATCCAAACACCCAACATGGTCTCCTGCAGCCATAAGATCAGCTTTGGTAACAACAGCATCTCAAGTTGGAACTGATGGAAGCCTTATATCTGAAGAGGGTTCCACACGCAAGGAAGCAGACCCATTTGATATTGGGGGTGGCCACGTGAACCCCAACAAAGCAATGGATCCAGGTCTTATATATGACATCATCACTGAGGATTATATCCAGTTCCTATGTTCCATGGGCTATAGTAGTGCATCCATAAGTAAAATGGCCAAAACAAAGAGCTCTCCGAGTTGTACGAAAGAGAAGCATCACCAAGGACTGAACCTTAACCTTCCTTCCATATCAGTTCCAAACCTGAAGAGAGCTGCAAAAGTTATTAGAACAGTGACAAACGTGGGAAGCATAACTGCTGTGTACAAGGCTCAATTGAAGGCTCCACATGGCATAAAAGTCAGAGTTGAACCTCAAATTCTGAGCTTCAATTCAGACTCTAGAGTTCTTTCATTCAGTGTCAGTTTTCTGTCAACTCAAAAGCTGCATCATGGAGATTATAAGTTTGGGAGCCTAACATGGACAGATGGCAAGCATCTTGTGAGGATCCCAATAGTCGTGAGGACCACAACATTTGAATCATAA	2361	0.4401	MNTNSRNWGWARKAQWKWLVTSALLLLQNFLVLSQIFADEATSSVHIVYMGDKMYDSPDTTRKYHHKILSSLLGSKEAAKNSILYSYKHGFSGFAARLTKYQAEEIAKFRGVVSVIPNRIHKLHTTRSWDFIGIHHPSSNTASTERNLGEGTIIGVIDTGIWPESKSFNDEAVGQIPSRWKGVCQVGEQFNSTNCNKKIIGARWFIKGLSDHNKKLIHGNDTGEFLSARDAIGHGTHTASTAAGYFVGNANYKGLASGLARGGAPLAHLAIYKACWGIPFGGCTDADILKAFDKAIHDGVDVLTVSIGLSIPLFSYVDQRDTIAIGSFHATAEGITVICSAGNSGPTSQTVANTAPWLITVAASTIDRAFPAAITLGNNRTVWGQSIDIGKHGLGSVGLTYSERIALDPDDDLAKDCQPGSLNATMAAGRIVLCFSLSDQQDIVSASLAVEEAGGVGLIYAQFHEDGLNSCGSFPCIKVDYEVGTQILSYIRRARFPTASLSFPKTLIGKWTSPRVASFSSRGPSSMSPTVLKPDIAAPGVDILAAFPPEGTTKKTGFAFLSGTSMSSPHVAGIAALIKSKHPTWSPAAIRSALVTTASQVGTDGSLISEEGSTRKEADPFDIGGGHVNPNKAMDPGLIYDIITEDYIQFLCSMGYSSASISKMAKTKSSPSCTKEKHHQGLNLNLPSISVPNLKRAAKVIRTVTNVGSITAVYKAQLKAPHGIKVRVEPQILSFNSDSRVLSFSVSFLSTQKLHHGDYKFGSLTWTDGKHLVRIPIVVRTTTFES*	787

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g2071	786	Pfam	Fibronectin type-III domain	683	779	IPR041469	-
	Dod04g2071	786	Pfam	Peptidase inhibitor I9	45	124	IPR010259	-
	Dod04g2071	786	MobiDBLite	consensus disorder prediction	605	627	-	-
	Dod04g2071	786	Gene3D	Peptidase S8/S53 domain	151	647	IPR036852	GO:0004252\|GO:0006508
	Dod04g2071	786	CDD	PA_subtilisin_like	374	501	-	-
	Dod04g2071	786	PANTHER	SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED	35	785	-	-
	Dod04g2071	786	PANTHER	PEPTIDASE S8	35	785	-	-
	Dod04g2071	786	PRINTS	Subtilisin serine protease family (S8) signature	230	243	IPR015500	-
	Dod04g2071	786	PRINTS	Subtilisin serine protease family (S8) signature	562	578	IPR015500	-
	Dod04g2071	786	PRINTS	Subtilisin serine protease family (S8) signature	149	168	IPR015500	-

Showing 1 to 10 of 18 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod04g2071	Dod-Chr4	44329304	44334205	Dispersed/Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod04g2071	40	786	Subtilisin-like Serine Gene Family	AT1G32960	50.663	0.0	736

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g2071	-		-	gmx:100792709	1301.58

Showing 1 to 1 of 1 entries