Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2058 ATGCAAACCCTGCAGTTGCACCATGCTTTTTTCAGTCACTTGTTTTCCAACTACCCTAGATCCTTTCTCTCCCTATTCTCCACTGTTTCTGTTTCTCTACCGACCCATTTCTCAGAGGAAAGATCTTCCATGCTCCATTACCTGAATTCAAGCTTCAAATTCTCAAAATATCAATCCATCTATGTCACCAAGCATGTTTCTATGGCCCGCCACCCTCAAAAGCCCTTTTGTGTCCTCAACTTCTTCAAAAAGATTGGATTTTCCGAAGCCCAGATTCACTCCATGGTTATCCAGAAACCTCAGTTGCTGTTTTCAGATGTTGACAGAACCCTGAGGCCAAAAATTGAGTTTTTTCAGAAGGTGGGTTTTGAGGGTTCTGAGCTGTGTGACTTCATTTCCAAGAATTCGACCATTTTGACATCTAGCTTGAAGAGAACACTGGTCCCTTCTGTGGAAGCTGTTAGGAAAATTGTGTGCAATGAGAGAGACTTTGTTCCGGTTCTGATCAGGTGTGGGAGGGTACTCCCAAAGTACCAAAAGTTTATGGCCAATGTTGCATTCTTGGAGAGTTGTGGGATTGTGGGGTCTCAGCTTTCGATGCTGCTGAAAAGACAGTCAAGGCTTTTCATCGCGCGAGAGGCTTTTCTTAGAAACCATGTCTCAAGGGCTGTGGACATGGGTTTCCATGAGAATTCAAGAATGTTGGTCCATGCACTCGACACCATCACTAGCTTAAGCTATAAAACGTTTAGTAGAAAGCTTGAGTTCATTCAGTGTTTTGGGTTTTCTAAAGTTGAGAGTATTCAAATGTTCCAAAAGGCTCCAGCTTTGCTTAGAACATCTGAGAAGAAATTGAGGGCTGGAATTGAATTCTTCTTGCATACAGCTATGGTTCCGAAGTCAGTCTTGGTTCACCGGCCTAATGTTTTGATGTACAGCACTGAGGATCGGGTGCTTCCGCGATATAGAGTTTTGCAGCTCCTGATAGCAGAAAACCTATTGAGGAAGGTCCCAAGATTTACTACTGTGTTGGGTTTGCCTGAGGAGGAGTTCCTGGACAAGTATATATCACGATTCAGAGAAAATGCAGAGGCATTATTGGTAGCTTACAAGGGTCATTATTTGGAAGTGTAA 1134 0.4321 MQTLQLHHAFFSHLFSNYPRSFLSLFSTVSVSLPTHFSEERSSMLHYLNSSFKFSKYQSIYVTKHVSMARHPQKPFCVLNFFKKIGFSEAQIHSMVIQKPQLLFSDVDRTLRPKIEFFQKVGFEGSELCDFISKNSTILTSSLKRTLVPSVEAVRKIVCNERDFVPVLIRCGRVLPKYQKFMANVAFLESCGIVGSQLSMLLKRQSRLFIAREAFLRNHVSRAVDMGFHENSRMLVHALDTITSLSYKTFSRKLEFIQCFGFSKVESIQMFQKAPALLRTSEKKLRAGIEFFLHTAMVPKSVLVHRPNVLMYSTEDRVLPRYRVLQLLIAENLLRKVPRFTTVLGLPEEEFLDKYISRFRENAEALLVAYKGHYLEV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2058 377 Gene3D Transcription termination factor 3, mitochondrial 177 363 IPR038538 -
Dod04g2058 377 Gene3D Transcription termination factor 3, mitochondrial 42 176 IPR038538 -
Dod04g2058 377 SMART mt_12 199 229 IPR003690 GO:0003690|GO:0006355
Dod04g2058 377 SMART mt_12 300 331 IPR003690 GO:0003690|GO:0006355
Dod04g2058 377 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Dod04g2058 377 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Dod04g2058 377 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Dod04g2058 377 PANTHER EMB|CAB62602.1 38 373 - -
Dod04g2058 377 PANTHER CGI-12 PROTEIN-RELATED 38 373 IPR003690 GO:0003690|GO:0006355
Dod04g2058 377 Pfam mTERF 178 351 IPR003690 GO:0003690|GO:0006355
Dod04g2058 377 Pfam mTERF 79 171 IPR003690 GO:0003690|GO:0006355
Dod04g2058 377 Pfam mTERF 154 258 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod04g2058 mTERF 2.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2058 K15032 - jre:108985778 344.354