Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2042 ATGCAGGTTGTTCGATCCCAGGCTCACAGGAACTTCTCCTCCTCCAACGACGCCGTCTCCTCCCTTCCGCCCCCTCCCCTATATCGCTCCGCTCCCGCCCTCGAAGTCAGGCTCGAAGACTTCGAGTCTTTCGCCATCGACCGCCTCCGAGTTCTCAAGGGGATTTCTGATGGCTTGTCACGGGGAAAGAAACCAGAAGAAATGGAAAATTTGGTGAAGGAGCTGTGGAAATCAAATATGAGACATCAACACACATCAGAGGTTCTCAACAAGGACATTATATCTCATTTCGTTCTCCGTCTGGTTTATTGCAGAACGGAGGAATTGAGGAAATGGTTCCTTTCTATGGAAACTGCACTGTTTCGGCACCGTTTTCATCATCAAAATGCTGAAGATCAGAGGGCAATCATGGAAGAATTTGACCTTTCTTACAGAGCTTTAAGCAATGTGGAATTTGAGAGCATAAAAGAGAAATTGAGACAAGTTGCACGATCCATTGGTCAGTCTTCGCCCACTGCTGATGCCATCTTCTACAAGGTACCGTTTGAAGAAGTTCCAGAGCTTGTAGCTGGACGGAAAGTATTTATAAATCAAGGATATGCATACGTTGCAATGAATCAGCTTGTTTCGCTTGTAGCCACACTATTTCGCAGTCAGCTGTCAAAGACACTCATCCTTACAAACAGAAAATGGACATCTTCAATCAGAGAACAGGAGAAACATAGATTGACTCCTATTGTGGAAGCCCTGAGCTCAAGTTATCTGGGTCCTGATTATTCTCAGCCAAGAGAATATGCTGAGATATCATTAAAGGACATTGATCAAGTTGCTAAGGGCTCATTTCCTTTGTGCATGCGTCATCTATTTGAAAAGCTGAGAGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAATTAGGCCTGTTTCTCAAGGGCGTCGGCCTGAACCTGGAGGATGCACTTGCCTTTTGGAGAGCCGAGTTCTCTAAAAAGGTTGGTTTGGAGAAGTTTGACAAAGAATATGCATACAACATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGATTATACTCCCTATTCTTGTCAAAAGATTATTTCATCGACTCCTGGCACTGGAGATCATCATGGTTGCCCTTATCGACATTTCAGTGAAGATAATTTAAGAGCTGCTCTCAGCAGAATGGGCGTTAATGGTCGAGCAATGGAAGATGTGATGGACAAAGTGAGAAATAGACATTATCAGTTGGCTTGCACCTTGACATTTGAAGCTCTTCATGGCATGCCATGTGATGCAGGGATTAACCATCCTAATCAATACTTTAGTGACAGCCAAAAGCTATTGCAGCCGAAGGTAGACTACAGTAAAATGAAATAA 1380 0.4391 MQVVRSQAHRNFSSSNDAVSSLPPPPLYRSAPALEVRLEDFESFAIDRLRVLKGISDGLSRGKKPEEMENLVKELWKSNMRHQHTSEVLNKDIISHFVLRLVYCRTEELRKWFLSMETALFRHRFHHQNAEDQRAIMEEFDLSYRALSNVEFESIKEKLRQVARSIGQSSPTADAIFYKVPFEEVPELVAGRKVFINQGYAYVAMNQLVSLVATLFRSQLSKTLILTNRKWTSSIREQEKHRLTPIVEALSSSYLGPDYSQPREYAEISLKDIDQVAKGSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLNLEDALAFWRAEFSKKVGLEKFDKEYAYNIRHNYGKEGKRTDYTPYSCQKIISSTPGTGDHHGCPYRHFSEDNLRAALSRMGVNGRAMEDVMDKVRNRHYQLACTLTFEALHGMPCDAGINHPNQYFSDSQKLLQPKVDYSKMK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2042 459 MobiDBLite consensus disorder prediction 1 24 - -
Dod04g2042 459 PIRSF DNA_primase_large 2 459 IPR016558 -
Dod04g2042 459 PANTHER DNA PRIMASE LARGE SUBUNIT 1 455 - -
Dod04g2042 459 MobiDBLite consensus disorder prediction 1 21 - -
Dod04g2042 459 Pfam Eukaryotic and archaeal DNA primase, large subunit 177 442 IPR007238 GO:0006269
Dod04g2042 459 CDD PriL_PriS_Eukaryotic 27 445 IPR016558 -
Dod04g2042 459 Gene3D - 2 250 - -
Dod04g2042 459 PANTHER DNA PRIMASE LARGE SUBUNIT 1 455 IPR007238 GO:0006269
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2042 1 453 Core DNA Replication Machinery Family AT1G67320 67.689 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2042 K02685 - gmx:100806321 809.29