Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2036 ATGAGTTTGCTCCATGTAGTTGGGTTTGGTCTAAAAGTGGGGCATCTACTTTTGGTGCTATGTTGCTGGGTTGTGTCTGTCGTTTACCTCAACTGCTTCACTACTAGCACTGCAACTGTGGACACCAAGATGTGGCTCAAATGGTGGGAGAAGATCTATGGGAATGGCTGCAGAGTCCACCAACGGTACTACGAGTATATTGGGTCCAAGAAAGTGGAGAGGACTTTGTGGAGAAAGCTTTTGTTGACATGGGTTGTGGTTTGGACCTTGGTTTGTTTGGGGATCTTCTGCTACATGAGCTTACAAGCCACTGAGAAGAGGAAAGAATCTCTTGCAAGCATGTGTGATGAGAGAGCAAGGATGCTGCAGGATCAGTTTAATGTGAGCATGAACCATATTCAAGCCATGTCCATTCTGATCTCAACCTTCCACCATGCCAAGAGCCCCTCAGCCATCGATCAGAGAACTTTTGCAAAATACACAGAAAGAACTGCTTTTGAGAGGCCCCTAACAAGTGGTGTTGCATATGCTGTGAGGGTGCTTCAATCTGAAAGGGAACAATTTGAGAAGCAACAGGGCTGGACTATTAAGAGAATGGATACTCTGGAGCAGAACCCGGTTCATAAGGACGATTATGCCCCTGAGGCATTGGAGCCATCCCCCATTCAGGAAGAATATGCTCCTGTCATCTTTGCACAAGATACCATTGCACATGTGATTTCTGTTGACGTGCTTTCTGGAAAGGAAGACCGTGAAAATGTGTTGCGTGCGAGGGAATCAGGCAAAGGGGTTTTAACTGCACCCTTCAGGCTGCTCAAATCAAATCGTCTAGGGGTTATCCTCACATTTGCTGTCTACAAGAGGGATCTTCCGTCAAATGCAACCCCAAATGAAAGGATTCAAGCAACTGATGGGTATCTCGGTGGGGTCTTCGATGTTGAGTCATTGGTGGAGAAATTACTGCAACAACTTGCTAGCAAGCAAACTGTAATTGTGAATGTGTATGATACTACGAATCATAGCCATCCAATTGCCATGTATGGTTCAAATGTATCCGGGGATGTGTTCCATCATGTCAGCACTCTTAACTTTGGAGACCCTTTCAGGAAGCATGAGATGCACTGCAGGTTCAAACAAAAACCACCATGGCCATGGTTGGCAATAACTACTTCAATAGGCATCCTTGTTATTGCACTCCTTGTTGGACATATTTTCTATGCCACTGTGAATCGAATTGCCAAAGTAGAAGAGGATTACCATCAGATGATGGAGCTTAAAAAACGAGCCGAGGCAGCTGACATTGCAAAATCTCAGTTTCTTGCTACTGTTTCCCACGAGATCAGAACACCGATGAATGGTGTTTTAGGGATGATGGATATGCTTATGGACACAGTTCTAGATGTAACTCAACAGGAATATGTCAGAACAGCACAGGGCAGTGGAAAAGCTCTGGTGTCACTTATAAATGAGGTTTTGGACCAGGCGAAGATTGAATCTGGTAAGCTAGAGCTTGAAGCAGTGCTCTTTGACTTGCGGGCAATTTTGGATGATGTATTATCATTATTTTCTGAGAAGTCTCAAGCAAAAGGAGTGGAGTTGGCAGTTTATGTATCAGATCAAGTTCCTGAACTGTTAATAGGTGATCCGGGAAGGTTTCGACAAATAATTACAAATCTCATGGGTAATTCAATTAAGTTCACGGACAAAGGGCATATTTTTGTCACTATACATCTTGTTGAGGAGGTTGTCCATTCAATTGAAGTTGACAAAGAATCAGCCTCAGAAAATACCTTGAGCGGTTTCCCTGTTGTTGATAGTCGCCGAAGCTGGGAAGAATTCAAGGCTTTCAGTCAAGAGGGACCTCTTGGTTCTTTCTCAACCTCCGCTAGTAATCTCATCAATTTGATTGTATCTGTTGAGGATACAGGTGAAGGAATTCCTGCAGAAGCCCAATCCCGCATCTTCATCCCATTCATGCAGGTTGGTCCGTCCACCACCCGAAAACATGGGGGAACAGGTATTGGCCTAAGCATTAGCAAGTGCTTAGTTGGCCTCATGAATGGGGAAATTGGATTTGAGAGCAAACTCAAGATTGGATCCACGTTTACTTTCACTGCTGTCTTCACCAATGGGCTTCCCAGTTCAAATGAGTGTAAAATTCAGCAAATCAACAACCAATCTCACCCTCCATCTTTAGAATTTGAGGGCATGACTGCATTAGTCATTGACTCAAGACCAGTTAGAGCAAAAGTGTCTAGATATCATATTCAAAGGCTTGGCATTCATGTTGAAATAGTTTCAGATTTAACCCAAGGTCTGTCCACCATAAGCAATGGGAATCAAGTTATCAATATGGTCCTTATTGAGCAGGAGGTGTGGGATAGAGACTCCCGCATGTCATCTCACTTTGTCAATAACACCAGTAAAGTTGATCGCAGGGTTCCTCCTAAGCTGTTCATTCTTGTTAATTCTAGTACTTCTTTTAGAGCAAGTACTGTACCCTCAGGTGTTCATAGTCCTACTGTCATCACAAAACCACTGAGAGCAAGTATGCTTGCTGCTTCACTACAACGAGCCATGGGCATCCAAAACAAGGGGCCTCCTCGAAACGGGGAGCTCCCAAGTTTGTCTCTTCGCCATCTTCTTCGTGGGAAAAAAATTCTAATTGTAGATGACAATAGTGTGAACCGCATGGTAGCAGATGGTGCTTTGAAAAAGTATGGAGCAGATGTGGTTTGCGTTAGCAGTGGAAGAGAAGCCATCTCTGCACTGAGGCCACCCCATAAGTTCGATGCCTGTTTCATGGATATTCAAATGCCAGAAATTGACGGTTTTGAAGCGACAAAGGAAATTCGGGATATGGAACGAAGTGCGAAGAGAGAATTATCCGAGGATAACTTTCAGAATATTTCAAACTGGCATGTCCCCATTTTAGCCATGACTGCGGACGTGATCCAGGCTACACATGAAGAATGCCTAAGGTGTGGCATGGATGGATATGTTTCAAAACCATTTGGAGCTGAACAGCTTTACAGAGAAGTCTCAAGGTTTTTCCAATCATCTTGA 3066 0.4397 MSLLHVVGFGLKVGHLLLVLCCWVVSVVYLNCFTTSTATVDTKMWLKWWEKIYGNGCRVHQRYYEYIGSKKVERTLWRKLLLTWVVVWTLVCLGIFCYMSLQATEKRKESLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKSPSAIDQRTFAKYTERTAFERPLTSGVAYAVRVLQSEREQFEKQQGWTIKRMDTLEQNPVHKDDYAPEALEPSPIQEEYAPVIFAQDTIAHVISVDVLSGKEDRENVLRARESGKGVLTAPFRLLKSNRLGVILTFAVYKRDLPSNATPNERIQATDGYLGGVFDVESLVEKLLQQLASKQTVIVNVYDTTNHSHPIAMYGSNVSGDVFHHVSTLNFGDPFRKHEMHCRFKQKPPWPWLAITTSIGILVIALLVGHIFYATVNRIAKVEEDYHQMMELKKRAEAADIAKSQFLATVSHEIRTPMNGVLGMMDMLMDTVLDVTQQEYVRTAQGSGKALVSLINEVLDQAKIESGKLELEAVLFDLRAILDDVLSLFSEKSQAKGVELAVYVSDQVPELLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHLVEEVVHSIEVDKESASENTLSGFPVVDSRRSWEEFKAFSQEGPLGSFSTSASNLINLIVSVEDTGEGIPAEAQSRIFIPFMQVGPSTTRKHGGTGIGLSISKCLVGLMNGEIGFESKLKIGSTFTFTAVFTNGLPSSNECKIQQINNQSHPPSLEFEGMTALVIDSRPVRAKVSRYHIQRLGIHVEIVSDLTQGLSTISNGNQVINMVLIEQEVWDRDSRMSSHFVNNTSKVDRRVPPKLFILVNSSTSFRASTVPSGVHSPTVITKPLRASMLAASLQRAMGIQNKGPPRNGELPSLSLRHLLRGKKILIVDDNSVNRMVADGALKKYGADVVCVSSGREAISALRPPHKFDACFMDIQMPEIDGFEATKEIRDMERSAKRELSEDNFQNISNWHVPILAMTADVIQATHEECLRCGMDGYVSKPFGAEQLYREVSRFFQSS* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2036 1021 CDD PRTases_typeI 840 914 IPR000836 -
Dod04g2036 1021 SMART REC_2 885 1014 IPR001789 GO:0000160
Dod04g2036 1021 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 547 708 IPR003594 -
Dod04g2036 1021 PRINTS Bacterial sensor protein C-terminal signature 635 649 IPR004358 GO:0016310|GO:0016772
Dod04g2036 1021 PRINTS Bacterial sensor protein C-terminal signature 653 663 IPR004358 GO:0016310|GO:0016772
Dod04g2036 1021 PRINTS Bacterial sensor protein C-terminal signature 670 688 IPR004358 GO:0016310|GO:0016772
Dod04g2036 1021 SMART HKATPase_4 547 710 IPR003594 -
Dod04g2036 1021 Pfam CHASE domain 151 347 IPR006189 -
Dod04g2036 1021 Gene3D - 880 1021 - -
Dod04g2036 1021 CDD REC_hyHK_CKI1_RcsC-like 887 1014 - -
Dod04g2036 1021 ProSiteProfiles Response regulatory domain profile. 886 1018 IPR001789 GO:0000160
Dod04g2036 1021 ProSiteProfiles Response regulatory domain profile. 738 860 IPR001789 GO:0000160
Dod04g2036 1021 Coils Coil 412 432 - -
Dod04g2036 1021 PANTHER TWO-COMPONENT HISTIDINE KINASE 48 1020 - -
Dod04g2036 1021 ProSiteProfiles CHASE domain profile. 148 374 IPR006189 -
Dod04g2036 1021 SMART CHASE_2 148 349 IPR006189 -
Dod04g2036 1021 SUPERFAMILY CheY-like 734 861 IPR011006 -
Dod04g2036 1021 PANTHER HISTIDINE KINASE 3 48 1020 - -
Dod04g2036 1021 SMART HisKA_10 435 500 IPR003661 GO:0000155|GO:0007165
Dod04g2036 1021 Pfam Response regulator receiver domain 887 1013 IPR001789 GO:0000160
Dod04g2036 1021 CDD HisKA 435 496 IPR003661 GO:0000155|GO:0007165
Dod04g2036 1021 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 421 501 IPR036097 GO:0000155|GO:0007165
Dod04g2036 1021 Gene3D CHASE domain 152 381 IPR042240 -
Dod04g2036 1021 Pfam His Kinase A (phospho-acceptor) domain 435 500 IPR003661 GO:0000155|GO:0007165
Dod04g2036 1021 CDD HATPase_EvgS-ArcB-TorS-like 552 708 - -
Dod04g2036 1021 Gene3D - 99 151 - -
Dod04g2036 1021 Gene3D - 404 498 - -
Dod04g2036 1021 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 489 705 IPR036890 -
Dod04g2036 1021 Gene3D - 499 710 IPR036890 -
Dod04g2036 1021 ProSiteProfiles Histidine kinase domain profile. 442 710 IPR005467 -
Dod04g2036 1021 SUPERFAMILY CheY-like 882 1018 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2036 Dod-Chr4 43865625 43870672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2036 1 1020 Miscellaneous Gene Families AT1G27320 67.658 0.0 1408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod04g2036 CHASE 1e-36 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2036 K14489 - gmx:100776798 1697.56