Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod04g2036 | ATGAGTTTGCTCCATGTAGTTGGGTTTGGTCTAAAAGTGGGGCATCTACTTTTGGTGCTATGTTGCTGGGTTGTGTCTGTCGTTTACCTCAACTGCTTCACTACTAGCACTGCAACTGTGGACACCAAGATGTGGCTCAAATGGTGGGAGAAGATCTATGGGAATGGCTGCAGAGTCCACCAACGGTACTACGAGTATATTGGGTCCAAGAAAGTGGAGAGGACTTTGTGGAGAAAGCTTTTGTTGACATGGGTTGTGGTTTGGACCTTGGTTTGTTTGGGGATCTTCTGCTACATGAGCTTACAAGCCACTGAGAAGAGGAAAGAATCTCTTGCAAGCATGTGTGATGAGAGAGCAAGGATGCTGCAGGATCAGTTTAATGTGAGCATGAACCATATTCAAGCCATGTCCATTCTGATCTCAACCTTCCACCATGCCAAGAGCCCCTCAGCCATCGATCAGAGAACTTTTGCAAAATACACAGAAAGAACTGCTTTTGAGAGGCCCCTAACAAGTGGTGTTGCATATGCTGTGAGGGTGCTTCAATCTGAAAGGGAACAATTTGAGAAGCAACAGGGCTGGACTATTAAGAGAATGGATACTCTGGAGCAGAACCCGGTTCATAAGGACGATTATGCCCCTGAGGCATTGGAGCCATCCCCCATTCAGGAAGAATATGCTCCTGTCATCTTTGCACAAGATACCATTGCACATGTGATTTCTGTTGACGTGCTTTCTGGAAAGGAAGACCGTGAAAATGTGTTGCGTGCGAGGGAATCAGGCAAAGGGGTTTTAACTGCACCCTTCAGGCTGCTCAAATCAAATCGTCTAGGGGTTATCCTCACATTTGCTGTCTACAAGAGGGATCTTCCGTCAAATGCAACCCCAAATGAAAGGATTCAAGCAACTGATGGGTATCTCGGTGGGGTCTTCGATGTTGAGTCATTGGTGGAGAAATTACTGCAACAACTTGCTAGCAAGCAAACTGTAATTGTGAATGTGTATGATACTACGAATCATAGCCATCCAATTGCCATGTATGGTTCAAATGTATCCGGGGATGTGTTCCATCATGTCAGCACTCTTAACTTTGGAGACCCTTTCAGGAAGCATGAGATGCACTGCAGGTTCAAACAAAAACCACCATGGCCATGGTTGGCAATAACTACTTCAATAGGCATCCTTGTTATTGCACTCCTTGTTGGACATATTTTCTATGCCACTGTGAATCGAATTGCCAAAGTAGAAGAGGATTACCATCAGATGATGGAGCTTAAAAAACGAGCCGAGGCAGCTGACATTGCAAAATCTCAGTTTCTTGCTACTGTTTCCCACGAGATCAGAACACCGATGAATGGTGTTTTAGGGATGATGGATATGCTTATGGACACAGTTCTAGATGTAACTCAACAGGAATATGTCAGAACAGCACAGGGCAGTGGAAAAGCTCTGGTGTCACTTATAAATGAGGTTTTGGACCAGGCGAAGATTGAATCTGGTAAGCTAGAGCTTGAAGCAGTGCTCTTTGACTTGCGGGCAATTTTGGATGATGTATTATCATTATTTTCTGAGAAGTCTCAAGCAAAAGGAGTGGAGTTGGCAGTTTATGTATCAGATCAAGTTCCTGAACTGTTAATAGGTGATCCGGGAAGGTTTCGACAAATAATTACAAATCTCATGGGTAATTCAATTAAGTTCACGGACAAAGGGCATATTTTTGTCACTATACATCTTGTTGAGGAGGTTGTCCATTCAATTGAAGTTGACAAAGAATCAGCCTCAGAAAATACCTTGAGCGGTTTCCCTGTTGTTGATAGTCGCCGAAGCTGGGAAGAATTCAAGGCTTTCAGTCAAGAGGGACCTCTTGGTTCTTTCTCAACCTCCGCTAGTAATCTCATCAATTTGATTGTATCTGTTGAGGATACAGGTGAAGGAATTCCTGCAGAAGCCCAATCCCGCATCTTCATCCCATTCATGCAGGTTGGTCCGTCCACCACCCGAAAACATGGGGGAACAGGTATTGGCCTAAGCATTAGCAAGTGCTTAGTTGGCCTCATGAATGGGGAAATTGGATTTGAGAGCAAACTCAAGATTGGATCCACGTTTACTTTCACTGCTGTCTTCACCAATGGGCTTCCCAGTTCAAATGAGTGTAAAATTCAGCAAATCAACAACCAATCTCACCCTCCATCTTTAGAATTTGAGGGCATGACTGCATTAGTCATTGACTCAAGACCAGTTAGAGCAAAAGTGTCTAGATATCATATTCAAAGGCTTGGCATTCATGTTGAAATAGTTTCAGATTTAACCCAAGGTCTGTCCACCATAAGCAATGGGAATCAAGTTATCAATATGGTCCTTATTGAGCAGGAGGTGTGGGATAGAGACTCCCGCATGTCATCTCACTTTGTCAATAACACCAGTAAAGTTGATCGCAGGGTTCCTCCTAAGCTGTTCATTCTTGTTAATTCTAGTACTTCTTTTAGAGCAAGTACTGTACCCTCAGGTGTTCATAGTCCTACTGTCATCACAAAACCACTGAGAGCAAGTATGCTTGCTGCTTCACTACAACGAGCCATGGGCATCCAAAACAAGGGGCCTCCTCGAAACGGGGAGCTCCCAAGTTTGTCTCTTCGCCATCTTCTTCGTGGGAAAAAAATTCTAATTGTAGATGACAATAGTGTGAACCGCATGGTAGCAGATGGTGCTTTGAAAAAGTATGGAGCAGATGTGGTTTGCGTTAGCAGTGGAAGAGAAGCCATCTCTGCACTGAGGCCACCCCATAAGTTCGATGCCTGTTTCATGGATATTCAAATGCCAGAAATTGACGGTTTTGAAGCGACAAAGGAAATTCGGGATATGGAACGAAGTGCGAAGAGAGAATTATCCGAGGATAACTTTCAGAATATTTCAAACTGGCATGTCCCCATTTTAGCCATGACTGCGGACGTGATCCAGGCTACACATGAAGAATGCCTAAGGTGTGGCATGGATGGATATGTTTCAAAACCATTTGGAGCTGAACAGCTTTACAGAGAAGTCTCAAGGTTTTTCCAATCATCTTGA | 3066 | 0.4397 | MSLLHVVGFGLKVGHLLLVLCCWVVSVVYLNCFTTSTATVDTKMWLKWWEKIYGNGCRVHQRYYEYIGSKKVERTLWRKLLLTWVVVWTLVCLGIFCYMSLQATEKRKESLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKSPSAIDQRTFAKYTERTAFERPLTSGVAYAVRVLQSEREQFEKQQGWTIKRMDTLEQNPVHKDDYAPEALEPSPIQEEYAPVIFAQDTIAHVISVDVLSGKEDRENVLRARESGKGVLTAPFRLLKSNRLGVILTFAVYKRDLPSNATPNERIQATDGYLGGVFDVESLVEKLLQQLASKQTVIVNVYDTTNHSHPIAMYGSNVSGDVFHHVSTLNFGDPFRKHEMHCRFKQKPPWPWLAITTSIGILVIALLVGHIFYATVNRIAKVEEDYHQMMELKKRAEAADIAKSQFLATVSHEIRTPMNGVLGMMDMLMDTVLDVTQQEYVRTAQGSGKALVSLINEVLDQAKIESGKLELEAVLFDLRAILDDVLSLFSEKSQAKGVELAVYVSDQVPELLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHLVEEVVHSIEVDKESASENTLSGFPVVDSRRSWEEFKAFSQEGPLGSFSTSASNLINLIVSVEDTGEGIPAEAQSRIFIPFMQVGPSTTRKHGGTGIGLSISKCLVGLMNGEIGFESKLKIGSTFTFTAVFTNGLPSSNECKIQQINNQSHPPSLEFEGMTALVIDSRPVRAKVSRYHIQRLGIHVEIVSDLTQGLSTISNGNQVINMVLIEQEVWDRDSRMSSHFVNNTSKVDRRVPPKLFILVNSSTSFRASTVPSGVHSPTVITKPLRASMLAASLQRAMGIQNKGPPRNGELPSLSLRHLLRGKKILIVDDNSVNRMVADGALKKYGADVVCVSSGREAISALRPPHKFDACFMDIQMPEIDGFEATKEIRDMERSAKRELSEDNFQNISNWHVPILAMTADVIQATHEECLRCGMDGYVSKPFGAEQLYREVSRFFQSS* | 1022 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod04g2036 | 1021 | CDD | PRTases_typeI | 840 | 914 | IPR000836 | - | |
Dod04g2036 | 1021 | SMART | REC_2 | 885 | 1014 | IPR001789 | GO:0000160 | |
Dod04g2036 | 1021 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 547 | 708 | IPR003594 | - | |
Dod04g2036 | 1021 | PRINTS | Bacterial sensor protein C-terminal signature | 635 | 649 | IPR004358 | GO:0016310|GO:0016772 | |
Dod04g2036 | 1021 | PRINTS | Bacterial sensor protein C-terminal signature | 653 | 663 | IPR004358 | GO:0016310|GO:0016772 | |
Dod04g2036 | 1021 | PRINTS | Bacterial sensor protein C-terminal signature | 670 | 688 | IPR004358 | GO:0016310|GO:0016772 | |
Dod04g2036 | 1021 | SMART | HKATPase_4 | 547 | 710 | IPR003594 | - | |
Dod04g2036 | 1021 | Pfam | CHASE domain | 151 | 347 | IPR006189 | - | |
Dod04g2036 | 1021 | Gene3D | - | 880 | 1021 | - | - | |
Dod04g2036 | 1021 | CDD | REC_hyHK_CKI1_RcsC-like | 887 | 1014 | - | - | |
Dod04g2036 | 1021 | ProSiteProfiles | Response regulatory domain profile. | 886 | 1018 | IPR001789 | GO:0000160 | |
Dod04g2036 | 1021 | ProSiteProfiles | Response regulatory domain profile. | 738 | 860 | IPR001789 | GO:0000160 | |
Dod04g2036 | 1021 | Coils | Coil | 412 | 432 | - | - | |
Dod04g2036 | 1021 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 48 | 1020 | - | - | |
Dod04g2036 | 1021 | ProSiteProfiles | CHASE domain profile. | 148 | 374 | IPR006189 | - | |
Dod04g2036 | 1021 | SMART | CHASE_2 | 148 | 349 | IPR006189 | - | |
Dod04g2036 | 1021 | SUPERFAMILY | CheY-like | 734 | 861 | IPR011006 | - | |
Dod04g2036 | 1021 | PANTHER | HISTIDINE KINASE 3 | 48 | 1020 | - | - | |
Dod04g2036 | 1021 | SMART | HisKA_10 | 435 | 500 | IPR003661 | GO:0000155|GO:0007165 | |
Dod04g2036 | 1021 | Pfam | Response regulator receiver domain | 887 | 1013 | IPR001789 | GO:0000160 | |
Dod04g2036 | 1021 | CDD | HisKA | 435 | 496 | IPR003661 | GO:0000155|GO:0007165 | |
Dod04g2036 | 1021 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 421 | 501 | IPR036097 | GO:0000155|GO:0007165 | |
Dod04g2036 | 1021 | Gene3D | CHASE domain | 152 | 381 | IPR042240 | - | |
Dod04g2036 | 1021 | Pfam | His Kinase A (phospho-acceptor) domain | 435 | 500 | IPR003661 | GO:0000155|GO:0007165 | |
Dod04g2036 | 1021 | CDD | HATPase_EvgS-ArcB-TorS-like | 552 | 708 | - | - | |
Dod04g2036 | 1021 | Gene3D | - | 99 | 151 | - | - | |
Dod04g2036 | 1021 | Gene3D | - | 404 | 498 | - | - | |
Dod04g2036 | 1021 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 489 | 705 | IPR036890 | - | |
Dod04g2036 | 1021 | Gene3D | - | 499 | 710 | IPR036890 | - | |
Dod04g2036 | 1021 | ProSiteProfiles | Histidine kinase domain profile. | 442 | 710 | IPR005467 | - | |
Dod04g2036 | 1021 | SUPERFAMILY | CheY-like | 882 | 1018 | IPR011006 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod04g2036 | Dod-Chr4 | 43865625 | 43870672 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod04g2036 | 1 | 1020 | Miscellaneous Gene Families | AT1G27320 | 67.658 | 0.0 | 1408 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Dod04g2036 | CHASE | 1e-36 | CL0165 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod04g2036 | K14489 | - | gmx:100776798 | 1697.56 |