Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2035 ATGGAGTGGAATGCGAAATCTCCCTCGCAGTGGGACTGGGAGCACCTATTTTTCTGCAATGGAAAAGCAGCAGAAAATCCCAAATTACAACCACCATACTGGGGTGATGAAGCAAATGGAGAAACCAATGTTGGCTTGTTGGATACATCTGGGGGCAGTGGTTGTTCTGAATCTGAGCTGATACATGCTTCTTCATCAAGGAGCTCAAAATCAGCTTCCATCAATTCATCATCAAATAGGGATAGCAAAACATCTGTATTCACTTTTGAAAGTTCCCAAGATGATTCCAGTGGTAAAAAAGAATTGTCTAAAGAGGAGCCAGTTGAAAATTCTCATGCACCAGACCCCTCCTCTGTCTCTGGCGAACCTTTGCTGACTCTAAAGCTAGGTAAGCGGTCGTACTTTGAGGATGCTTGCCCAGGAGTTGGTTCCAAGAACCTATCTCCCTCTGGGGCTCCCATTTCATCCTTGAGTACCGGCAAGAAGTGCAAGTCCAATGGTCAGAACATACAAAATCCACGCTGCCAGGTTCAAGGCTGTGGTCTTGACCTTTCATCAGCTAAAGATTACCATCGCAAACATAGAGTTTGCGAGAGTCATTCCAAATCCCCTAAGGTGGTTATTGCTGGTTTGGAACGTCGCTTTTGCCAGCAATGTAGCAGGTTCCATTGTCTGTCAGAATTTGATGAAAAAAAGAGAAGCTGCAGAAGACGTCTTTCAGATCACAATGCAAGGCGCCGCAAACCTCATCCTGCTGCCCAATTAAATCAATCAGCTTTGTCTTCATCACCTTATGTTAGGAGGCAACAGATGAGTCCTTTCGCCTATTCGAGGACTGCTACAAATTTAGCCTGGCAGGGCATACGCTGCGGCAAGCTCCCTCATACAAAAGATTTTCTCATGAAGCCTGTGAAAGCCAACAGCGAGATGCCTAGTATTGTCACTATGCTTTCTGATGATTCCAACACCTGTCTTACATCCAAAGCCATTGCAGCCAAGAGTATTAATCCAGGTGTAGAGGATTCCATAACCTCGTCCTCTGATCCAAATGCTGCTGCACAAGATTTTCACCGTGCTCTCTCTCTTCTGTCAACCAATTCATGGGGCTCATACGAGACAAAGTCCATTTCTATGGAACACTCGAATCACACCACTCATCAGCACATAACGAATCAGCGCTTACCTGTTGCTGCTGCTGCTGCTTCAACAGAATATTGGCATACTGATCAACAGCCACTGAATTCCAGCATGTGGATCACCTACCCGAATTGCGAAGACAGCAATCGATTTCAGCTGTTCAGAGAACCTTATGAGTCTGGTTTTCCACACGACCATTTGGGTTAG 1344 0.4561 MEWNAKSPSQWDWEHLFFCNGKAAENPKLQPPYWGDEANGETNVGLLDTSGGSGCSESELIHASSSRSSKSASINSSSNRDSKTSVFTFESSQDDSSGKKELSKEEPVENSHAPDPSSVSGEPLLTLKLGKRSYFEDACPGVGSKNLSPSGAPISSLSTGKKCKSNGQNIQNPRCQVQGCGLDLSSAKDYHRKHRVCESHSKSPKVVIAGLERRFCQQCSRFHCLSEFDEKKRSCRRRLSDHNARRRKPHPAAQLNQSALSSSPYVRRQQMSPFAYSRTATNLAWQGIRCGKLPHTKDFLMKPVKANSEMPSIVTMLSDDSNTCLTSKAIAAKSINPGVEDSITSSSDPNAAAQDFHRALSLLSTNSWGSYETKSISMEHSNHTTHQHITNQRLPVAAAAASTEYWHTDQQPLNSSMWITYPNCEDSNRFQLFREPYESGFPHDHLG* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2035 447 MobiDBLite consensus disorder prediction 94 111 - -
Dod04g2035 447 MobiDBLite consensus disorder prediction 43 93 - -
Dod04g2035 447 Gene3D - 165 236 IPR036893 GO:0003677|GO:0005634
Dod04g2035 447 Pfam SBP domain 175 248 IPR004333 GO:0003677
Dod04g2035 447 MobiDBLite consensus disorder prediction 239 263 - -
Dod04g2035 447 MobiDBLite consensus disorder prediction 27 123 - -
Dod04g2035 447 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 20 443 IPR044817 GO:0003677
Dod04g2035 447 ProSiteProfiles Zinc finger SBP-type profile. 172 249 IPR004333 GO:0003677
Dod04g2035 447 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 2 20 443 - -
Dod04g2035 447 SUPERFAMILY SBT domain 173 253 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2035 Dod-Chr4 43819201 43823907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2035 1 409 SBP-box Gene Family AT5G43270 38.534 6.34e-64 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Dod04g2035 SBP 9.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2035 - - gmx:100781289 540.421