Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2013 ATGGCGGCTGGGAGACATGGCGGTTATCGTGACAACGAGTTTAGGGACCGGGAGTCCAATTTGGATGTTTCGAGGCGTAGTTTCACGAATTCGAAGGAAGATGTTAGGAATGGAGGCCATGATGTTGTGAGGAGTGGGAGCAGGGATGCAAGGGATAGGATTAGGGTTAGGCAGAAGGATATCAGGGAGAGAGAAGCTGCCAATGGAAGCTACCGATCATCGTCGAGTAGGAGCGACTCTGGCAGCAGTGGAGGTGGTGGTAGTGGCGACCTTGGCCCTAGGCGGTGTGGTTTCTCTGTCAAGACCATGGATAGGGAGCCTGGTGAGCTTTCCAGTGAGAGTGGATCCGAGGGTGCTATTGAATCAGAGTCACGGATGAAAGACACTGAGGTTGCTAATGTTGAACAGAATAATAGGGTTCGGTCACCCCCACCAGAGAGGAAAAGGAAGTTTTCGCCGATTGTGTGGGATCAGGATGACAAGGAAGTGAATGAGTCGTCCAAATCCAAAGTTAGGGTTTCCACCACAACGGTGACTGCTCTTCCTCCTCCACCCCCGCTGCCGAAAACCTTCCTTCGGTCACCTAATTCTTTGTATGGTGGAGTTGAAATACATCCTGTCAAAAACAGAGAATCTGAGGATATTGAGTTACCTGAAGAAACTAAAGTTGCTTCGCCTTCTCCTTCAGGTTTGCATTCATTGTCACCCAAACAGACGTGGCATAATGTTCAGGAAGCTGAGCAGCTAGACAGTGAGGATTATGTTCCAAGTCATAATATATCATCTTCAAGATGGGCAGCTGTTGATAACTCTCCTGGTGATGAAGGTGAAATCATCGATGATGAGGAGATGCCTAGAAGGAGGAGGAGGTTGTCTCCTGAGTTGTTGGATGCCAGAGCAAGGAACAAGCTAGTGAGCCCTGTGGAATGTAAAAGAGAAGGATTTGAAGGAGCTAGAACCAAATCATCTGAGTCTGAAGAACGGGGTAGTCATGGGAGAACGTCCAGTGGTGATGATCATCCTGGTACTGCATTAGAGAAGGATGACTATATGGAGATTGATGCTCAAGGTGGAAAAAGTGATACTAGTATTAGTCACTCGGATACTGATTCTGAAGATGAAGATGATAGGAGGGAGACTCCAGAACCTCCAGCTCCACCACAAAGAATGGTTAACATGCTCCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATACGGTGTTGTATATAGGGCCAGAGATAAGAAGACTGGGGAAATTGTAGCATTGAAGAAGGTCAAGATGGAGAAGGAAAAAGAAGGCTTCCCACTGACCTCTCTTAGGGAAATTAACATTCTTCTTTCGTTTCACCACCCATCCATAGTAGACGTTAAAGAAGTAGTGGTAGGGAGTAGCCTTGATAGCATTTTCATGGTTATGGAGTACATGGAACATGATCTTAAAGGTCTGATGGAAGCAATGAAGCAACCGTTCAGCCAAAGTGAAGTAAAGTGTCTAATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAAACATCAAACCTGCTTCTGAATAATAGAGGTGAGCTAAAAATATGTGATTTCGGGCTGGCACGTCAGTACGGGAGTCCATTGAAACCATATACACACCTGGTGGTTACCCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTATTCAACAGCCATTGACATGTGGTCTCTTGGTTGTATAATGGCTGAGCTATTATCCAAAGAACCATTATTTAATGGGAAAACAGAATTTGATCAACTTGACAAGATTTTTAGGATTCTTGGCACACCAAATGAAACAATTTGGCCCGGGTTTTCAAAACTACCTGGAGTCAAGGTCAATTTTGTCAAGCACCAGTATAACCTTCTGCGTAAAAAGTTCCCTGCCACGTCATTCACTGGATCTCCAGTTCTTTCTGATTCTGGATTTGATTTGCTGAACAAGCTTCTTACTTATGACCCTGAAAAGCGGATCACAGCTGAAGATGCTCTCAATCATGAGTGGTTCCGTGAAGTTCCTCTTCCCAAGAGTAAAGAATTTATGCCTACCTTTCCTGCTCAACATGCTCAAGACAGGAGGATGCGGAGAGTATTAAAGAGTCCGGATCCTTTGGAGGAGCAGCGCCGGAAGGAGTTGCAGCAGGGTGAATCAGGCACTGGTGGAATTTTTGGCTAA 2250 0.4542 MAAGRHGGYRDNEFRDRESNLDVSRRSFTNSKEDVRNGGHDVVRSGSRDARDRIRVRQKDIREREAANGSYRSSSSRSDSGSSGGGGSGDLGPRRCGFSVKTMDREPGELSSESGSEGAIESESRMKDTEVANVEQNNRVRSPPPERKRKFSPIVWDQDDKEVNESSKSKVRVSTTTVTALPPPPPLPKTFLRSPNSLYGGVEIHPVKNRESEDIELPEETKVASPSPSGLHSLSPKQTWHNVQEAEQLDSEDYVPSHNISSSRWAAVDNSPGDEGEIIDDEEMPRRRRRLSPELLDARARNKLVSPVECKREGFEGARTKSSESEERGSHGRTSSGDDHPGTALEKDDYMEIDAQGGKSDTSISHSDTDSEDEDDRRETPEPPAPPQRMVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEDALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRRVLKSPDPLEEQRRKELQQGESGTGGIFG* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2013 749 MobiDBLite consensus disorder prediction 724 738 - -
Dod04g2013 749 MobiDBLite consensus disorder prediction 312 390 - -
Dod04g2013 749 PANTHER CELL DIVISION PROTEIN KINASE 129 749 - -
Dod04g2013 749 PANTHER - 129 749 - -
Dod04g2013 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Dod04g2013 749 Pfam Protein kinase domain 403 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2013 749 MobiDBLite consensus disorder prediction 312 355 - -
Dod04g2013 749 MobiDBLite consensus disorder prediction 206 220 - -
Dod04g2013 749 MobiDBLite consensus disorder prediction 254 268 - -
Dod04g2013 749 MobiDBLite consensus disorder prediction 141 168 - -
Dod04g2013 749 CDD STKc_CDC2L1 397 694 IPR045267 GO:0004674|GO:0005524|GO:0006468
Dod04g2013 749 MobiDBLite consensus disorder prediction 8 67 - -
Dod04g2013 749 MobiDBLite consensus disorder prediction 68 85 - -
Dod04g2013 749 SMART serkin_6 403 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2013 749 MobiDBLite consensus disorder prediction 365 383 - -
Dod04g2013 749 MobiDBLite consensus disorder prediction 226 245 - -
Dod04g2013 749 SUPERFAMILY Protein kinase-like (PK-like) 395 700 IPR011009 -
Dod04g2013 749 Gene3D Phosphorylase Kinase; domain 1 388 485 - -
Dod04g2013 749 MobiDBLite consensus disorder prediction 120 134 - -
Dod04g2013 749 ProSiteProfiles Protein kinase domain profile. 403 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2013 749 MobiDBLite consensus disorder prediction 280 295 - -
Dod04g2013 749 MobiDBLite consensus disorder prediction 724 749 - -
Dod04g2013 749 Gene3D Transferase(Phosphotransferase) domain 1 486 727 - -
Dod04g2013 749 MobiDBLite consensus disorder prediction 1 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2013 Dod-Chr4 43560413 43567417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2013 394 740 Core Cell Cycle Gene Families AT5G10270 45.333 2.32e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Dod04g2013 Pkinase 1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2013 K08818 - gmx:100792524 1108.2