Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2003 ATGTACCTGTCAGAAAAACCACGCCCCATAGATTTCTACAAAGAAGACGGCACTCCACGTGACATGATCATAGAGGTCGTCGCCAACGCCAACGCCGGCGGCGACCTCCCTCCGCCGCCGCCCCACCACCATCACCAGCAGCAGATGATCCTCGGCGACAGCAGCGGCGGCGAGGACCCGGAGGTTGAGATCAAGGCCCCCAAGAAGCGCGCCGAGACGTGGGTCCACGAGGAGACACGAACCCTCATCGCGCTCCGGCGAGAGATGGACGGGCTCTTCAACACTTCGAAATCGAACAAGCATCTTTGGGAGCAGATATCGTCGAAGATGCGTGACAAGGGCTTCGATAGGTCTCCGACCATGTGCACCGACAAGTGGAGGAACCTCCTCAAAGAGTTCAAGAAGGCCAAGCACGGCGGCGATACCGCAGGAGGAGGAGGAGGCAGTGGCGGTGGCTCCGCCAAGATGTCTTATTACAAGGAGATTGAGGAGATACTGAGGGATAGGAGCAAGTGTGTGCAGTACAAGAGCCCCACTCCACCACCACCTCCTCCTCCTCCTACAACCAATCACAAAGTTGATTCCTTCATGCAGTTCACTGATAAAGGTATTGACGATACTGGCATCTCTTTTGGTCCTGTTGAAGCTACTGGAAGACCAACACTCAATCTCGAGAGACGTTTGGATCATGACGGACATCCTCTTGCCATTACCACGGCCGATGCTGTCGCGGCTAGTGGAGTTCCTCCTTGGAATTGGAGAGAAACTCCTGGAAATGGTGAAGAAGGTCAGTCATGTTGTGGAAGGGTCATATCAGTTAAATGGGGTGATTATACAAGGAGGATAGGTATTGATGGTGCTTCAGAAGCCATCAAGGAGGCAATAAGAGCTGCTTTTAGGTTGAGAACTAGACGTACATTTTGGTTGGAGGATGAAGACCAGATAATCAGAAGTATTGACCGTGACATGCCTTTAGGAAATTACACTCTTCACCTTGATGAAGGTAAATATAAGCTCATTTTATTCTTATTGCGGCATCCGAATTCCTGGAAACCTAATTTTGTTGGCCAGAAAATTTTTGGGCAAAATACATTTTACCCTCCTGAATTTAAGGTGTTTTTTAAACTTGATACATGA 1137 0.5004 MYLSEKPRPIDFYKEDGTPRDMIIEVVANANAGGDLPPPPPHHHHQQQMILGDSSGGEDPEVEIKAPKKRAETWVHEETRTLIALRREMDGLFNTSKSNKHLWEQISSKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHGGDTAGGGGGSGGGSAKMSYYKEIEEILRDRSKCVQYKSPTPPPPPPPPTTNHKVDSFMQFTDKGIDDTGISFGPVEATGRPTLNLERRLDHDGHPLAITTADAVAASGVPPWNWRETPGNGEEGQSCCGRVISVKWGDYTRRIGIDGASEAIKEAIRAAFRLRTRRTFWLEDEDQIIRSIDRDMPLGNYTLHLDEGKYKLILFLLRHPNSWKPNFVGQKIFGQNTFYPPEFKVFFKLDT* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2003 378 MobiDBLite consensus disorder prediction 31 70 - -
Dod04g2003 378 CDD GT1 72 137 - -
Dod04g2003 378 Pfam Myb/SANT-like DNA-binding domain 73 165 IPR044822 -
Dod04g2003 378 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 335 - -
Dod04g2003 378 Gene3D - 74 136 - -
Dod04g2003 378 ProSiteProfiles Myb-like domain profile. 66 130 IPR001005 -
Dod04g2003 378 SUPERFAMILY Homeodomain-like 70 131 IPR009057 -
Dod04g2003 378 PANTHER - 5 335 - -
Dod04g2003 378 SMART sant 70 132 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2003 Dod-Chr4 43475913 43481877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2003 12 335 Trihelix Transcription Factor Family AT3G25990 66.154 6.10e-148 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod04g2003 Myb_DNA-bind_4 3.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2003 - - aip:107632016 575.859