Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1992 ATGTTGCAAAAGCAGCCCAATAATCCTTTCAGAGATTCTATCAAGTCTCTTGAAGCTGATATCCAACATGCCAACACATTGGCATCAGCACTCCCTAGAGATTATGGAGGGGACTACATTCGAATGAAGTTATCTTACAGCCCTCTTGCTCCTCTCTTCTTGTCTTTGATAGAGTGGTTGGATTTTAGTTGCACAGATGATCTTCCCTCTTATTTGGGCTTGCTCCACATACTTATATTCAATGTATACGTTGATGGAATGCCATCTATTTCCTCAAAAGAAAGGAAAGCCACTCTAAAAGAATTCTATTCTGTGATATACCCATCGCTGAGGCTACTTGAAGGCGAATTTAATGTATCCAGAAACAAAGATCAGAGAAGCAGTTGCAGCCAAGTTATGAGCAGAAAGAGGCTTGAAAAGTTATTACATGAAGAAGAAGAGGAAGATGATGAATGTGGGATATGCATGGAGAACAGCAGGAAGATGGTACTGCCTAATTGTGGCCATTCTTTGTGCATTAGCTGCTTCCATGATTGGTATTTGAGATCAGAATCATGTCCATTTTGCCGTGGCAGCCTCAAGAGGGTAACTCCTGCAGATTTATGGGAGGTTATTGGCAACAGGGATGTGATTGACAGGGCTACCCTTGCAATGGAGAATTTAAGACGTTTCTATCATTTCATGGAAGCCCTACCACATAACATGCCGGATGCATATGTGTTTGAATATAACTACATGCTCTGA 744 0.414 MLQKQPNNPFRDSIKSLEADIQHANTLASALPRDYGGDYIRMKLSYSPLAPLFLSLIEWLDFSCTDDLPSYLGLLHILIFNVYVDGMPSISSKERKATLKEFYSVIYPSLRLLEGEFNVSRNKDQRSSCSQVMSRKRLEKLLHEEEEEDDECGICMENSRKMVLPNCGHSLCISCFHDWYLRSESCPFCRGSLKRVTPADLWEVIGNRDVIDRATLAMENLRRFYHFMEALPHNMPDAYVFEYNYML* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1992 247 PANTHER RING-H2 FINGER PROTEIN ATL47-LIKE 7 247 - -
Dod04g1992 247 PANTHER RING FINGER PROTEIN 41, 151 7 247 - -
Dod04g1992 247 Pfam Zinc finger, C3HC4 type (RING finger) 148 195 - -
Dod04g1992 247 ProSiteProfiles Zinc finger RING-type profile. 152 190 IPR001841 -
Dod04g1992 247 SMART ring_2 152 189 IPR001841 -
Dod04g1992 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 200 IPR013083 -
Dod04g1992 247 SUPERFAMILY RING/U-box 140 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1992 Dod-Chr4 43383832 43385955 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1992 151 198 C3H Transcription Factor Family AT2G42030 46.154 7.11e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1992 - - adu:107481966 386.341