Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1976 ATGACGTCACGTTCAGGGCATGGTGGTGGAGGAAGCACCAGCGGGAGTGGTAGCAGGACGAGGGTGGGGAAATACGAGATGGGTCGGACCCTTGGTGAGGGGAACTTCGCAAAGGTGAAGTTTGCACGCAACACAGAGACAGGGGAGAATGTGGCCATCAAGATTCTTGACAAAGAAAAAGTCCTCAAGCACAAAATGATAGGCCAGATAAAACGAGAAATATCAACAATGAAACTGGTTAGACACCCCAATGTCATACGCTTGCATGAGGTCATGGCTAGCAAGACAAAGATATACATTGTATTGGAACTTGTGACTGGTGGGGAACTGTTTGATAAGATTGCAAGCCAAGGGAGGCTGAAAGAAGATGAAGCAAGGAAATATTTTCAGCAGCTTATATGTGCTGTGGATTACTGTCACAGTAGAGGTGTTTGCCATAGAGACTTGAAGCCTGAGAATTTGTTGCTGGATGCTAATGGAACGCTTAAAGTATCAGATTTTGGATTGAGTGCACTGCCTCAACAACTTCGAGAAGATGGGCTGCTTCACACAACATGTGGTACGCCGAATTATGTTGCCCCGGAGGTGATCCACAATAAAGGCTATGATGGTGCAAAGGCTGATCTCTGGTCATGTGGTGTCATTCTTTTTGTTTTAATGGCTGGCTATTTGCCCTTTGAGGAAAACAACCTTATGGCTTTATACAAAAAGATTTTCAAGGCTGAGTTCACTTGTCCTCCATGGTTTTCTTCAAGTGCAAAGAAATTAATCAAGAGAATCCTCGACCCCAATCCTGCTACACGAATTACATTTGCTGAGGTCATTGAGAATGAGTGGTTCAAGAAGGGGTATAAACCTCCACAATTTGAGCAGGAAGACGTTAATCTTGATGATGTAAATACTATTTTCAATGAAGCAGTGGATTCACCAAATCTTGTAGTGGAGAGGCGAGAAGAGGGGCCTGTGGCACCTGTGACTATGAATGCGTTTGAGCTTATCTCTACGTCTCAGGGCCTCAACCTTAGAAATCTTTTCCAGAAGCAGATGGGACTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTTCAGCAGATGAGATAATTTCAAAAATTGAGCAAGCTGCAGTGCCTTTGGGTTTTGATGTTAAGAAGAACAACAGCAAGTTGAAGATTCAAGGGGAAAAGAGTGGGCGTAAAGGCCATCTAGCAGTAGCCACTGAGATCTTGGAGGTGGCCCCTTCACTTAACATGGTTGAGCTTCGCAAGTGTGGAGGAGATACTCTGGAATTTCACAAGTTCTACAAGAATCTATCTACTGGGCTGAAAGATATCATTTGGAAAGCAGAGCCTATCGATCAAGAGCCAGATGGTGCCAGTACATCAAAATAA 1389 0.4392 MTSRSGHGGGGSTSGSGSRTRVGKYEMGRTLGEGNFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLVRHPNVIRLHEVMASKTKIYIVLELVTGGELFDKIASQGRLKEDEARKYFQQLICAVDYCHSRGVCHRDLKPENLLLDANGTLKVSDFGLSALPQQLREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGYLPFEENNLMALYKKIFKAEFTCPPWFSSSAKKLIKRILDPNPATRITFAEVIENEWFKKGYKPPQFEQEDVNLDDVNTIFNEAVDSPNLVVERREEGPVAPVTMNAFELISTSQGLNLRNLFQKQMGLVKRETRFTSKCSADEIISKIEQAAVPLGFDVKKNNSKLKIQGEKSGRKGHLAVATEILEVAPSLNMVELRKCGGDTLEFHKFYKNLSTGLKDIIWKAEPIDQEPDGASTSK* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1976 462 CDD CIPK_C 328 443 - -
Dod04g1976 462 MobiDBLite consensus disorder prediction 1 22 - -
Dod04g1976 462 Gene3D Kinase associated domain 1, KA1 322 447 - -
Dod04g1976 462 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1976 462 MobiDBLite consensus disorder prediction 1 20 - -
Dod04g1976 462 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 452 - -
Dod04g1976 462 Pfam NAF domain 324 384 IPR004041 GO:0007165
Dod04g1976 462 CDD STKc_SnRK3 24 279 - -
Dod04g1976 462 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Dod04g1976 462 Pfam Protein kinase domain 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1976 462 Gene3D Transferase(Phosphotransferase) domain 1 105 287 - -
Dod04g1976 462 Gene3D Phosphorylase Kinase; domain 1 15 104 - -
Dod04g1976 462 ProSiteProfiles NAF domain profile. 322 346 IPR018451 GO:0007165
Dod04g1976 462 PANTHER SERINE/THREONINE KINASE 19 452 - -
Dod04g1976 462 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1976 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Dod04g1976 462 SUPERFAMILY Protein kinase-like (PK-like) 22 293 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1976 Dod-Chr4 43185877 43192444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1976 8 454 CBL-interacting serine-threonine protein kinases AT1G01140 69.536 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dod04g1976 Pkinase 1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1976 - - adu:107482008 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1976 04 43185877 43192444 Dod04g1976 04 43185877 43192444 ECH