Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1966 ATGGAGGAGGATGAGATCCAAGCACAGGCGTGTAAATTCCCAAGAGTAGGAAATGGTGGAAGAAACGACCCTAATAACAAGATAGGTCCGAGGGATCATCATCATGAGGATGTTGAGAATGGATCAGGAGGAGGAGGAGAGCTCATCAAAGGAAGAAGAGGAGGGGGCAGTGATGGCAGCACAACAAACAGGCTCCACGGCTGGCACCACCACTCCTCAAGGATCATAAGGGTGTCTCGTGCATCTGGTGGCAAAGACAGGCACAGCAAGGTCATGACCTCAAAGGGTTTAAGGGACAGAAGGGTGAGGCTTTCTGTCACCACCGCCATTCAGTTCTATGATCTCCAAGACCGCTTGGGCTATGACCAGCCAAGCAAGGCTGTTGAGTGGCTAATCAACTCAGCTTCAGATGCAATTGCTGAGCTCCCTTCATTGAACACCACATTCCCTGACACACCTAAGCAACCAAGCGATGAGAAGAGGGCTAGTGTGGGAACCGAGCAAGGGTTTGATTCAGCTGATGCAGAGCTTGATGGGGAGGGTAACTACAACCATCAGCAGAACCAAAGCCAGAACCTTTCCTTGTCCAAATCTGCTTGCAGCAGCACTTCTGAGACAAGCAAAGGCTCTGGCTTGTCACTCTCAAGGTCTGATATCCGTGTCAAGGCCAGAGAGAGGGCAAGGGAGAGAGCAGCCAAGGAGAAGAAGAAGGACACAAACAACAACAATGAGCCTCATCATCAGATCAATGCTCATCACCAAATGAACCCCATTTCTCAAACAGCTTCATTCACTGAGCTTCTAACTGGTGGGATCAACAACGCAGTTCCAACCACTACTAGTCCAACTGGGTCAATTCATCAGAACCATGGGAGTGATGGGCCTAATCTGTCCAACAAAGCAGCAAGACAACAACAACAACAACAGTGGGGTTCAGCACCAATGGCCATGGACTACTTCAGCCCAGTGTTTCTGGGGCCTTCCTCGTCTTCAAGAACCCAACAACAGCAGCACCACCACCACCACAACAACCAGTCTTGTTCCTCTGCAGGGTTCTCAGCATCACAAATCCAACTGGGGCATTCCCTTGCTGAGGCCATGTCGTTCAATGTGAGTGGTGGTGGTGATCAGAATCACTCATCCGATCAGCTGCAGCAGCACTTTTCCTTCATCCATGATCACCTCATGCCAGCTGTGGCTACTTCTTCTCAACCACCGAGTGCTGGTGGGAACAACAACAACAACAACAATGAGTACAACCTGAACTTCACAATGTCTTCTTCTTCGGGCCTTGCTGGTTACAACAACAATAGGGGGACCCTTCAGTCCAATTCTTCTCCGTCTCATCATCATATTTTGTCTCATCACCTGCAGAGGTTTTCAGTGCCTATGGACGGATCCACTGTACCTTTCTTCTTTGGAACTGCTGCTGGTGGTTCTGCACCTATTGCTTCTGCTGCTGCTGCTATGGAGAACCACCACCATCACCACCTGTTCTCGCCTGCCTTTGATGCCCGCTTGCAACTCTGCTATGGCGGCGACGGAAGCCGGCACTCTGACCAGAAGGGGAAAGCCAAGAACTGA 1584 0.5044 MEEDEIQAQACKFPRVGNGGRNDPNNKIGPRDHHHEDVENGSGGGGELIKGRRGGGSDGSTTNRLHGWHHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLINSASDAIAELPSLNTTFPDTPKQPSDEKRASVGTEQGFDSADAELDGEGNYNHQQNQSQNLSLSKSACSSTSETSKGSGLSLSRSDIRVKARERARERAAKEKKKDTNNNNEPHHQINAHHQMNPISQTASFTELLTGGINNAVPTTTSPTGSIHQNHGSDGPNLSNKAARQQQQQQWGSAPMAMDYFSPVFLGPSSSSRTQQQQHHHHHNNQSCSSAGFSASQIQLGHSLAEAMSFNVSGGGDQNHSSDQLQQHFSFIHDHLMPAVATSSQPPSAGGNNNNNNNEYNLNFTMSSSSGLAGYNNNRGTLQSNSSPSHHHILSHHLQRFSVPMDGSTVPFFFGTAAGGSAPIASAAAAMENHHHHHLFSPAFDARLQLCYGGDGSRHSDQKGKAKN* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1966 527 MobiDBLite consensus disorder prediction 26 41 - -
Dod04g1966 527 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 527 IPR005333 GO:0003700
Dod04g1966 527 MobiDBLite consensus disorder prediction 144 256 - -
Dod04g1966 527 MobiDBLite consensus disorder prediction 181 214 - -
Dod04g1966 527 ProSiteProfiles TCP domain profile. 84 142 IPR017887 -
Dod04g1966 527 MobiDBLite consensus disorder prediction 272 314 - -
Dod04g1966 527 PANTHER TRANSCRIPTION FACTOR TCP24 1 527 - -
Dod04g1966 527 Pfam TCP family transcription factor 83 237 IPR017887 -
Dod04g1966 527 MobiDBLite consensus disorder prediction 272 350 - -
Dod04g1966 527 MobiDBLite consensus disorder prediction 1 73 - -
Dod04g1966 527 MobiDBLite consensus disorder prediction 218 243 - -
Dod04g1966 527 ProSiteProfiles R domain profile. 217 235 IPR017888 -
Dod04g1966 527 MobiDBLite consensus disorder prediction 324 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1966 Dod-Chr4 42987610 42998949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1966 63 527 TCP Transcription Factor Family AT4G18390 41.408 8.78e-72 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod04g1966 TCP 2.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1966 - - lang:109362619 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1966 04 42987610 42998949 Dod04g1966 04 42987610 42998949 ECH