Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1959 ATGAGGAGGAATTGCAACTTAGAACTACGCCTTTTCCCTCTTTACGATTCCGAACACCGACCCACGACGGAAGAAGAAGCAAACGAGAGCCCACAAGAACAACACTGCCAACCCAAACACCAGCAGCTACATCAGAACCAGCCGTTGACCATTTTCTATGATGGCAAGATTTGCGTCAGTGATGTCACAGAGTTTCAGGCAAGGTCCATCTTAATGCTTGCAAATAAAGAGATGGAGGAAAGAGTGAGGACACCAAATGGGTCAGAGCCATCTTCACCATTACTGCAATCAAAACACAATTTGAATAGCCCGGTGACTACTCCTTCCATGAAAAGATCGCTGCAGAGATTTCTCCAGAAGAGAAAGAATCGGATCCAAGAAGCATCCCCATACCATAACTAG 402 0.4577 MRRNCNLELRLFPLYDSEHRPTTEEEANESPQEQHCQPKHQQLHQNQPLTIFYDGKICVSDVTEFQARSILMLANKEMEERVRTPNGSEPSSPLLQSKHNLNSPVTTPSMKRSLQRFLQKRKNRIQEASPYHN* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1959 133 MobiDBLite consensus disorder prediction 85 114 - -
Dod04g1959 133 MobiDBLite consensus disorder prediction 16 42 - -
Dod04g1959 133 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 132 IPR040390 -
Dod04g1959 133 SMART tify_2 42 76 IPR010399 -
Dod04g1959 133 MobiDBLite consensus disorder prediction 16 33 - -
Dod04g1959 133 Pfam tify domain 45 75 IPR010399 -
Dod04g1959 133 Pfam Jas motif 111 131 IPR018467 -
Dod04g1959 133 ProSiteProfiles Tify domain profile. 42 76 IPR010399 -
Dod04g1959 133 MobiDBLite consensus disorder prediction 79 117 - -
Dod04g1959 133 PANTHER - 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1959 Dod-Chr4 42915121 42917654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1959 1 133 Tify Gene Family AT1G30135 47.407 4.49e-29 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod04g1959 tify 1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1959 - - gmx:100305565 178.333